Arvicanthis niloticus (African grass rat): 117722211
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Entry
117722211 CDS
T08817
Symbol
Hdac4
Name
(RefSeq) histone deacetylase 4 isoform X1
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04371
Apelin signaling pathway
anu04613
Neutrophil extracellular trap formation
anu05034
Alcoholism
anu05203
Viral carcinogenesis
anu05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117722211 (Hdac4)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
117722211 (Hdac4)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
117722211 (Hdac4)
05203 Viral carcinogenesis
117722211 (Hdac4)
09165 Substance dependence
05034 Alcoholism
117722211 (Hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117722211 (Hdac4)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117722211 (Hdac4)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117722211 (Hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Oxidored_nitro
Motif
Other DBs
NCBI-GeneID:
117722211
NCBI-ProteinID:
XP_034377047
EnsemblRapid:
ENSANLG00005013638
LinkDB
All DBs
Position
17:13137684..13351620
Genome browser
AA seq
1087 aa
AA seq
DB search
MSSQSHPDGLSGRDQPVELLNPTRVNHMPSTVDVATALPLQVTPAAVPMDLRLDHQFSLP
LEPALREQQLQQELLALKQKQQIQRQILIAEFQRQHEQLSRQHEAQLHEHIKQQQEMLAM
KHQQELLEHQRKLERHRQEQELEKQHREQKLQQLKNKEKGKESAVASTEVKMKLQEFVLN
KKKALAHRNLNHCISSDPRYWYGKTQHSSLDQSSPPQSGVSASYNHPVLGMYDAKDDFPL
RKTASEPNLKLRSRLKQKVAERRSSPLLRRKDGPVATALKKRPLDVTDSACSSAPGSGPS
SPNSSSGNVSTENGIAPTVPSAPAETSLAHRLVTREGSVAPLPLYTSPSLPNITLGLPAT
GPAAGAASQQDAERLALPALQQRISLFPGTHLTPYLSTSPLEREGGAAHNPLLQHMVLLE
QPPTQTPLVTDWYLSGLGALPLHTQSLVGADRVSPSIHKLRQHRPLGRTQSAPLPQNAQA
LQHLVIQQQHQQFLEKHKQQFQQQQLHLSKMISKPSEPPRQPESHPEETEEELREHQALL
DEPYLDRLPGQKEPSLAGVQVKQEPIESEEEEVEASREAEPSQRPATEQELLFRQQALLL
EQQRIHQLRNYQASMEAAGIPVSFGSHRPLSRAQSSPASATFPMSVQEPPTKPRFTTGLV
YDTLMLKHQCTCGNTNSHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSE
AHTLLYGTNPLNRQKLDSKKLLGSLTSVFVRLPCGGVGVDSDTIWNEVHSSGAARLAVGC
VVELVFKVATGELKNGFAVVRPPGHHAEESTPMGFCYFNSVAVAAKLLQQRLNVSKILIV
DWDVHHGNGTQQAFYNDPNVLYVSLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGG
LEPPMGDAEYLAAFRTVVMPIANEFAPDVVLVSSGFDAVEGHPTPLGGYNLSAKCFGYLT
KQLMGLAGGRIVLALEGGHDLTAICDASEACVSALLGNELEPLPEKVLHQRPNANAIHSM
EKVMDIHGKYWRCLQRLSSTVGHSLIEAQKCENEEAETVTAMASLSVGVKPAEKRSEEEP
MEEEPPL
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgagctcccaaagccatccagatggactttctggtcgagaccagcccgtggagctgctg
aatcctacccgtgtgaaccacatgcccagcacagtggacgtggctacagcgctgcctctg
caagtgacccctgcagcagtacccatggatctgcgcttggaccaccagttctcactgccc
ttggaacctgcattgcgggagcagcagctgcagcaggaactcctagcactgaaacagaag
cagcagatccagcggcagatcctcattgcagagttccagcgtcaacacgagcagttgtcc
cgacagcatgaggcacagttgcatgaacatatcaagcagcagcaggagatgctggccatg
aagcaccagcaggagctgctggagcaccagcggaaactggagcggcaccggcaagagcag
gagctggagaagcagcaccgtgagcagaagctgcagcagctcaagaacaaggagaagggc
aaagagagtgctgtggcgagcacagaggtgaaaatgaagctgcaggagtttgttctcaac
aagaagaaggctctggcccaccggaacctgaaccactgcatttccagcgatccccgctac
tggtatgggaagacacagcacagctcccttgatcagagctctccaccccagagtggggtg
tcagcctcctacaaccaccccgtcttgggaatgtacgacgccaaagatgacttccctctt
aggaaaacagcttctgaacctaacctgaaattacggtcaaggcttaagcagaaagtagct
gagagacggagcagccccctgttgcgcaggaaagatggccctgtggccactgctctaaaa
aagcgacccctggatgttacagactccgcatgcagcagcgcccctggctccggtcccagc
tctcccaatagcagctctggcaacgtcagcactgagaatggcatcgcacccactgtgccc
agcgctccagctgagacgagcttggcacacagacttgtgactcgagaaggctcagttgcc
ccacttcctctctacacgtcaccgtccttacccaatatcaccttgggacttcccgccact
ggccctgccgctggtgctgcaagccagcaggatgctgagaggcttgctctcccagccctc
cagcagcggatctccttatttcctgggacccacctcaccccgtacctgagcacctcaccc
ctggagcgggaaggtggagcagctcacaaccccctcctgcagcatatggtcctgctggag
cagccacccacccagaccccccttgtcacagactggtatctttcaggcctgggggcgctg
cccctccacacacagtccctggttggtgcggacagggtgtccccatccattcacaagctg
cggcagcaccgccctctggggcgcacacagtcagcacccctgccgcagaatgcacaggcc
ctgcagcacctggtgatccagcagcagcaccagcagttcctggagaagcacaagcaacag
ttccagcagcagcagctgcacctcagcaagatgatctccaaacccagtgagccacctcgg
cagcctgagagccaccctgaggagacagaggaggagctccgtgaacaccaggccttgctg
gatgagccctacctagatcggctccctgggcagaaggagccctccctagctggtgtgcag
gtgaagcaggagcccattgagagtgaggaggaagaagtggaggcctctcgagaggcggaa
cccagccagcgcccagccactgaacaggaactacttttcagacagcaagctctcctactg
gagcagcaaaggatccaccagttaaggaactaccaggcatctatggaggctgctggtatc
cctgtgtcatttggtagccacagacctctgtctcgggcacagtcctccccagcatctgcc
accttccctatgtcagtccaggagccccccaccaaaccaaggttcaccacaggccttgta
tatgacacactgatgttgaagcatcagtgtacctgtggaaacaccaacagccacccggag
catgctggaagaatccagagcatctggtcccgcctgcaggagactggcctccgtggcaag
tgtgagtgcatccgcggacgcaaggccacattggaagagctgcagacagtgcactcagaa
gcccacacactcctctatggcacaaaccctctcaacagacagaaactggacagtaagaaa
cttctaggctcgctgacctccgtgtttgtcaggcttccttgtggtggtgttggggtggat
agcgacaccatatggaatgaggtgcattcatctggggcagcccgcctggctgtaggctgt
gtagtggagctggtcttcaaggtggccacaggagagctcaagaatggctttgctgtggtt
cgtcctccaggacaccatgccgaggaaagcacacccatgggtttctgctactttaactct
gtggcagttgcagccaaacttctccagcagaggctgaatgtgagcaagatcctcattgta
gattgggatgtgcaccatgggaatgggacgcagcaggccttctacaatgaccccaatgtt
ctctacgtgtccctgcaccgctatgacgatgggaacttcttcccaggaagtggagcaccg
gatgaggtgggcacagggccaggtgtgggtttcaatgtcaacatggctttcacgggtggc
ctcgaaccccccatgggagacgccgagtacctggcggccttcagaacggtggtcatgccc
atcgcaaatgagtttgccccagatgtggtattggtgtcatcgggctttgatgctgtggag
ggccaccccacacctcttggagggtacaatctctctgctaaatgtttcgggtacttgaca
aaacagctgatgggcttagctggtggccggattgtgctggcccttgagggaggccatgac
ctgacagccatctgtgatgcttctgaagcatgtgtttctgctctgctgggaaatgagctt
gagcctctaccagaaaaggttctacatcagagacccaatgctaatgccatccactccatg
gagaaagtgatggacatccacggcaagtactggcgctgcctgcagcgtttgtcctccact
gtggggcactctctaattgaggcacaaaagtgtgagaatgaagaagctgagacagtcacc
gccatggcctcgctgtctgtaggtgtcaaacctgctgagaagagatctgaggaggagccc
atggaggaggaaccaccactgtag
DBGET
integrated database retrieval system
