Arvicanthis niloticus (African grass rat): 117722526
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Entry
117722526 CDS
T08817
Symbol
Ptchd4
Name
(RefSeq) patched domain-containing protein 4 isoform X1
KO
K24682
patched domain-containing protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
anu04990
]
117722526 (Ptchd4)
Domain-containing proteins not elsewhere classified [BR:
anu04990
]
Other domain-containing proteins
Patched domain-containing proteins
117722526 (Ptchd4)
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GFIT
Motif
Pfam:
Patched
Sterol-sensing
Motif
Other DBs
NCBI-GeneID:
117722526
NCBI-ProteinID:
XP_034377614
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Position
17:50587313..50771345
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AA seq
901 aa
AA seq
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MRRPGAPASWIWWRMLRQVLRRGLQSFCHRLGLCVSRHPVFFLTVPAVLTITFGLSALNR
FQTEGDLERLVAPSHSLAKIERSLASSLFPLDQSKSQLYSDLHTPGRYGRVILLSPPGDN
ILLQAEGILQTHRAVMEMKVNHKGYNYTFSHLCVLRNQDKKCVLDDIISVLEDLRQAAVS
NKTTARVQVRYPNTKLKDGRNSFIGHQLGGVVEVANSKDQRVKSARAIQITYYLQTYGSA
TQDLIGEKWENEFCKLMRKLQDEHQDLQLYSLASFSLWRDFHKTSILTRSKVLVSLVLIL
TTATLSSSMKDCLRSKPFLGLLGVLTVCISIATAAGIFFITDGKYNSTLLGIPFFAMGHG
TKGVFELLSGWRRTKENLPFKDRVADAYSDVMVTYTMTSSLYFITFGMGASPFTNIEAVK
IFCQNMCVSILLNYFYIFSFFGSCLVFAGQLEQNRYHSIFCCKIPSAEYLDRKPVWFQTV
MSDGHQQTSHHETNPYQHHFIQHFLREHYNEWITNIYVKPFVVILYLIYASFSFMGCLQI
SDGASIINLLASDSPSVSYAMVQQKYFSNYSPVIGFYVYEPLEYWNSSVQEDLQRLCSGF
TAVSWVEQYYQFLKASNISANNKTDFISVLQSSFLKKPEFQHFRNDIIFSRAGDENNIIA
SRLYLVARTSRDKQKEVIEVLDKLRPLSLSKSIRFIVFNPSFVFTDHYSLSVTVPVLIAG
FGVLLVLILTFFLVIHPLGNFWLILSVTSIELGVLGLMTLWNVDMDCISILCLIYTLNFA
IDHCAPLLYTFVLATEHTRTQCIKSSLQEHGTAILQNITSFLIGLVPLLFVPSNLTFTLF
KCLLLTGGCTLLHCFVILPVFLTFFPPSKKHHKKKKRAKRKEREEIECIEIQENPDHVTT
V
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggccgggagcgcctgcgagctggatctggtggaggatgctgcggcaggtgctt
cgcagagggctccagtcattctgccacaggctgggcttatgcgtgagccggcacccggtc
tttttcctcaccgtgccggcagtcctgaccatcaccttcggcctcagcgcgctcaaccgc
ttccagaccgagggcgacctggagcgcctggttgctcccagccacagcctggccaagatc
gagcgcagcctagccagcagcctattccccctggaccagtccaaaagccagctctattcg
gacttacacacccctgggaggtatggcagggtgatcctcctctccccacccggggacaat
attttgctccaggctgaggggatcctgcagacccaccgagccgtgatggaaatgaaggtg
aaccacaagggctataattatactttttcccatctgtgtgtgttgagaaatcaggataag
aaatgcgtgctggatgatattatttcagtgctagaggatctcaggcaggctgccgtctcc
aataagactacagccagggtgcaagtaaggtatcccaacactaaattaaaggatgggagg
aacagttttattggacaccagctgggcggggtagtggaagtggcaaacagcaaagaccag
cgggtcaagtcagccagagccattcaaatcacctactacctccagacctatggttctgcc
actcaagacctcataggggagaagtgggagaatgagttctgtaagcttatgaggaagctc
caggatgagcaccaagacctccaactgtactctctggcatcttttagcctctggagagac
tttcataagaccagcatcctgaccagaagcaaggtcctggtgagcctcgtgctgatcctg
accacggccaccctgtccagctccatgaaggactgcttgcgcagtaagcccttcctgggc
ctcctgggggtgctcacggtatgcatttccatcgccactgcagccgggatcttcttcatc
actgatgggaagtacaactccaccctgctgggaatccctttcttcgccatgggtcacgga
actaaaggagtatttgagcttctgtctggatggcggagaaccaaagagaatttacccttc
aaagacagggtagcagatgcctattctgatgtgatggtcacctacaccatgaccagttcc
ctgtacttcatcacgtttggtatgggtgccagccccttcacaaacatagaggcagtgaag
atcttctgtcagaatatgtgtgtctctattctattgaactacttctacattttctctttc
tttggctcttgcctggtctttgctggacaacttgagcaaaatcgataccacagcatcttt
tgctgtaagatcccttctgcggaatacctggaccgcaagcctgtgtggttccagacagta
atgagtgatgggcaccaacagacatcccatcatgagacaaacccctaccagcaccatttc
attcagcacttcctccgagaacattacaatgagtggattaccaatatctatgtgaagcca
tttgtggtcatcctgtatctcatttacgcctctttctccttcatggggtgcttgcagatc
agtgatggagccagcatcatcaacctactagccagtgactcccccagtgtttcctatgcc
atggttcagcaaaaatatttcagcaactatagccctgtcataggattctacgtctatgaa
cccctggagtactggaacagcagtgtccaagaggatctgcagaggctctgtagtgggttc
actgcagtgtcctgggtggaacagtattatcagtttctgaaagcaagcaacatcagtgcc
aataacaagactgacttcatcagtgtcctacaaagctcgtttttaaaaaagccagagttc
caacactttcggaatgatatcattttctccagagctggagatgaaaacaatatcatcgct
tctcgcttatatctggtggccaggactagcagggacaagcagaaggaagtcatagaagtt
ctggacaagttgaggcccctgtctctctctaagagtatccggttcatcgtgtttaaccct
tcctttgtttttacagaccattacagtttgtcagtcactgtgcctgttctgattgcaggc
tttggagtcctcctggtgttaatcctgactttcttcctagtgatccatcctctgggaaac
ttctggctaattcttagcgtcacctcaattgagctgggcgtcctgggcttaatgacgttg
tggaatgtcgacatggattgcatttctatcttgtgccttatctacactttaaattttgcc
attgaccactgtgcaccactgctttatacgtttgtattagcaaccgagcacaccagaaca
caatgtataaaaagctccctgcaagagcatgggacagccattttgcaaaacattacttct
tttcttattgggttggtccccctcctctttgtgccttcaaacctgaccttcacactgttc
aaatgcctgctgctgaccgggggttgcacgcttctgcactgttttgttatcttacctgtg
tttctaaccttttttcctccttccaaaaagcaccacaagaaaaagaaacgtgccaaacga
aaggagagagaggaaattgaatgcatagaaatccaagagaaccctgatcacgtcaccaca
gtctga
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