Arvicanthis niloticus (African grass rat): 117722716
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Entry
117722716 CDS
T08817
Symbol
Trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117722716 (Trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117722716 (Trip12)
Enzymes [BR:
anu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117722716 (Trip12)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
HECT type E3
117722716 (Trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
117722716
NCBI-ProteinID:
XP_034377866
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All DBs
Position
17:19588792..19697738
Genome browser
AA seq
2068 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDSIGGRSHLGQAKRKGYIPPESRKSNFKAPKVQ
SNTTSELSRGHLSKRSCSSSSAVIVPQPEDPDRANTSERQKTGQVPKKDNSRGVKRSASP
DYNRTNSPSSAKKPRAFQHIESLSETNKPHSKSKKRHLDQEQQLKSSQLPSTSKAHTRKS
VAAGSSRSQKRKRTESSCVKSGSGSESTGAEERSAKPTKLASKSATSAKAGCSTITDSSS
AASTSSSSSAVASASSTVPAGARVKQGKDQNKARRSRSASSPSPRRSSREKEQSKTGGSS
KFDWAARFSPKVSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELP
SLRRSTRQKTTGSCASTSRRGSGLGKRGAAEARRQEKMADPESNQETVNSSAARTDEAPQ
GAAASSSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIG
SGASSKAQQLLQGLQASDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQME
HNFDIMNHACRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRR
HSKAILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLT
HQDKKSVESTCLCFARLVDNFQHEENLLQQVASKDLLTNVQQLLVVTPPILSSGMFIMVV
RMFSLMCSNCPTLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLIC
ELMPCLPKEGIFAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEVAAHQVGE
DEISLSTLGRVYTIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGYSELKKDDARAQLM
KEDPELAKSFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVS
SHIASMLSSQDLKIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKHLAESESLLTSPP
KACTNGSGSLGSTPPASSGTATAATNASADLGSPSLQHSRDDSLDLSPQGRLSDVLKRKR
LPKRGPRRPKYSPPRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSAQSNSNNIEP
ARTAGVSGLARAASKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLC
AATEQLNLQVDGGAECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKNEKDAVSREI
RLKRFLHVFFSSPLPGEEPLGRVEPVGHAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNG
AGGSFSLNRGSQALKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVV
RGYGRVREDDEDSDDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGEHLLPYNMTVYQAVR
QFSVQAEDERESTDDESNPLGRAGIWTKTHTIWYKPVREDEESSKDCVGGKRGRAQTAPT
KTSPRNAKKHDELWHDGVCPSVANPLEVYLIPTPPENITFEDPSLDVILLLRVLHAISRY
WYYLYDNAMCKEIIPTSEFINSKLTAKANRQLQDPLVIMTGNIPPWLTELGKTCPFFFPF
DTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNREELLKQAES
VMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLSNPKGSQ
EGTKYIQNLQGLFALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYK
WMLRQETSLTSHDLFDIDPVVARSVYHLEDIVRQKKRLEQDKSQTKESLQYALETLTMNG
CSVEDLGLDFTLPGFPNIELKKGGKDIPVTIHNLEEYLRLVIFWALNEGVCRQFDSFRDG
FESVFPLSHLQYFYPEELDQLLCGSKADTWDAKTLMECCRPDHGYTHDSRAVKFLFEILS
SFDNEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLK
LPDYSSIEIMRDKLLIAAREGQQSFHLS
NT seq
6207 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gccggggcccaaccacaagacgactcaataggaggaaggtcacatttagggcaggcaaaa
cgtaagggatatatccctcctgagagtagaaaatctaattttaaggcacccaaagtgcaa
tctaatactacttctgaactgtcaaggggacacctttctaaaagaagctgcagttcatca
tctgctgtcatagttccacaaccagaggatccagacagagccaatacttcagaaaggcag
aaaacggggcaggtgcctaaaaaggacaattctcgaggagtgaaacgcagtgctagtcca
gactacaacaggaccaattctcctagctctgcgaaaaaacccagagcatttcagcatatt
gagtctctctcagaaaccaataagccacatagtaagtcaaagaagagacatttagaccag
gagcaacaactgaaatcttcacaattgccgtcaacaagcaaggctcacaccagaaagagt
gtggctgctggtagttcacggagtcagaaaagaaagaggacagagagttcttgtgttaag
agtggttctgggtccgaatcaactggtgccgaagagagatctgcaaaacccaccaagctg
gcttcaaaatcggccacctcagccaaagctgggtgtagcaccatcactgattcttcttct
gctgcctctacttcctcctcatcttcagctgtagcctcggcctcttctactgtaccagca
ggtgccagggtgaaacaaggaaaagaccagaacaaggccaggcgttcccgttcagcatcc
agccctagtcccagaagaagtagcagggaaaaggaacagagtaaaactggtggctcttca
aaatttgattgggctgctcgattcagccccaaagttagcctacctaaaacaaaactgtct
cttccagggtcttctaagtcagagacatcaaaacctggaccttctggattacaggccaaa
ttagcaagcttaagaaagtctaccaagaagcgcagtgagtccccacctgctgagctcccc
agtttgaggaggagcacacgccaaaagaccacgggctcctgtgctagtaccagtcggcga
ggctctggcctgggcaagagaggagcagctgaggcccggcggcaagagaaaatggcagac
cctgaaagcaatcaggagacagtaaattcctcagctgcccggacagatgaagctccccaa
ggagccgcagcctctagttctgttgcaggggctgttggcatgaccacctctggggagagt
gaatcggatgattctgagatgggacgattacaagctctgttagaggccaggggtcttcct
cctcacctgtttggtcctcttggtcctcggatgtcacaactttttcatagaacaattgga
agcggagctagttctaaggcccagcagcttcttcaaggattacaagccagtgatgaaagt
caacagcttcaggcagtcattgaaatgtgtcagctattggtcatggggaatgaggagaca
ctaggagggtttcctgtgaagagtgttgttccagctttgataacattactgcaaatggaa
cataattttgacattatgaatcatgcttgccgagccttaacgtatatgatggaagcgctc
cctcggtcatctgctgtcgtagtagatgctatccctgttttcttagaaaagctgcaagtt
attcagtgtattgatgtggcagagcaggccttgactgccttggagatgttgtcacgccga
cacagtaaagccatcttacaggcaggtggtttggcagactgtttgttgtatctagaattc
ttcagcatcaatgcccaaagaaatgcactagcaattgcagccaattgctgccagagtatc
acaccagatgagtttcattttgtggcagattccctaccattgcttacccaaaggctaact
catcaggacaaaaagtcagtagaaagcacttgcctttgttttgcacgtttagtggataac
tttcaacatgaggagaacttactgcaacaggttgcttccaaagatctacttacaaatgtt
caacaactgttggtggtgactccaccgattttaagttctgggatgtttattatggtggtt
cgaatgttttctctgatgtgttccaactgtccaacattagctgttcaacttatgaaacaa
aacattgcagaaacacttcacttcctcctatgtggtgcctccaatggaagttgtcaagaa
cagattgatcttgttccacgaagtcctcaagaactgtatgaactgacatctctgatttgt
gaacttatgccatgtttaccaaaagaaggcatttttgcagttgataccatgttgaaaaag
ggaaatgcgcagaacacagatggtgcaatatggcagtggcgtgatgaccgaggcctctgg
catccctataacaggattgacagccggatcattgaggtagcagcccatcaggtcggtgag
gatgagataagcttgtccactctgggacgagtttatactattgattttaattctatgcag
caaatcaatgaggacacgggaacagcacgtgccattcagagaaaacctaaccccttagcc
aatactaacactagtggatattcagagttaaagaaggatgatgctcgagcacagctaatg
aaagaagatccggaactggctaagtctttcattaagaccttatttggtgttctctatgaa
gtgtatagctcctcagcaggacctgcagtcagacataagtgccttagagcaattcttagg
ataatttattttgctgatgctgaacttctgaaagatgttctgaaaaatcatgctgtttca
agtcacattgcttccatgctatcaagccaagacctgaagatagtagttggagcgcttcag
atggcagaaatcctaatgcaaaagttacctgatatttttagtgtttacttcaggagagaa
ggtgtgatgcatcaagtaaaacatttagcagaatcagagtctttgttgacaagtcctcca
aaggcatgtacaaatgggtcaggatcactgggatctacaccaccagccagcagtgggact
gccacggcagcaaccaatgcctctgctgatctcggctcacctagcttgcagcatagcaga
gatgattctctggatctgagccctcaaggtcgattaagtgatgttctcaagagaaaacga
ctgccaaaacgagggccaagaaggccaaagtattcccccccaagagatgatgacaaagta
gacaatcaagctaaaagccctaccactactcagtcacctaaatcttcctttctggcaagt
ttgaatccaaaaacatggggaaggttaagcgcacagtccaacagcaacaacattgaacca
gcacgaactgcaggagttagtggtcttgctagggcagcctcaaaagacaccatatccaat
aatagagaaaaaattaaaggctggattaaggagcaggcacataaatttgttgaacgttat
tttagttctgagaatatggatggaagcaaccctgccttgaatgtccttcagagactttgt
gctgcaactgaacaactcaacctccaggtggatggtggagctgagtgccttgtagaaatc
cgtagcatagtctcggagtcagatgtttcttcatttgaaattcaacatagtgggtttgtg
aagcaactgttgttgtatttgacatctaagaatgaaaaggatgctgtcagcagagagatc
cgattaaagcgtttccttcatgtatttttttcttctccacttcctggagaagagcctctt
ggaagagtagaaccagtgggccatgcgcctttgttggcattggttcacaagatgaacaac
tgtcttagccaaatggagcaatttccagtcaaagtgcatgatttccctagtggaaatgga
gctggaggcagcttttctctcaacagaggatcacaagctttaaaatttttcaacacacat
cagttaaaatgtcagttacaaagacacccagactgtgcaaatgtgaagcagtggaaaggc
ggtcctgtcaagattgatcccctggctctggtgcaagctattgagagataccttgtggtt
agaggatatggaagagtaagagaagatgatgaagacagtgatgatgatgggtcagatgaa
gaaatagatgagtctctggctgctcaatttttaaattcgggaaatgtaaggcacaggcta
cagttttatattggagaacatctactaccatacaacatgactgtgtatcaggccgtgcgg
cagttcagcgtacaagctgaagatgaaagagaatctactgatgatgagagcaatcctctg
ggaagagctggaatttggacaaagactcatacaatatggtacaaacccgtgagagaggat
gaagaaagtagtaaagattgtgttggtggcaaaagggggagagcccaaacagctccaaca
aaaacttcccccagaaatgcaaagaaacatgatgagttatggcatgatggagtgtgcccg
tcagtagcaaatcctttagaagtttacctcattcccacaccacctgaaaatatcaccttt
gaagacccatctttagatgtaatacttcttttaagagttttacatgccatcagtcgatat
tggtattacttgtatgataatgcgatgtgcaaggagattattcctactagtgaatttatt
aacagtaaattaacagcaaaagcgaataggcagcttcaagatcctctagtaatcatgaca
ggaaacatcccaccatggctcactgagctaggaaagacctgcccatttttctttcctttt
gatacccgacaaatgcttttttatgtaactgcatttgatcgggaccgagcaatgcaaaga
ttacttgataccaacccagaaatcaaccagtctgattctcaagacagcagagttgcgcct
agattggatagaaaaaaacgtactgtgaacagagaggagctactgaaacaagccgagtct
gtgatgcaggaccttggtagctctcgggccatgttagaaatccaatatgaaaatgaggtt
ggtacaggtttggggccaacactggagttttatgcacttgtttctcaggaactacagaga
gctgacttgggtctctggagaggtgaagaagtaactcttagcaatccaaaaggaagccaa
gaagggaccaagtatattcaaaacctgcagggcctgtttgcgcttccctttggtaggaca
gctaagccagctcacatcgcaaaggttaagatgaagtttcgcttcttaggaaaactaatg
gctaaggctatcatggatttcagattggtggaccttccacttggcctccctttttataag
tggatgttgcggcaggaaacttcactgacatctcatgatttatttgacattgatcctgtt
gtagccagatcagtatatcacctagaagacattgtcagacagaagaaaagactggagcag
gataagtctcagaccaaagagagtctacagtatgcattggaaactcttacgatgaatggc
tgctcagtggaagatttgggattagattttacgctgccaggatttcccaacattgaattg
aagaaaggagggaaggatattccagttactatccacaatttggaagaatacctaagattg
gtgatattctgggcactaaatgaaggtgtttgtcggcagtttgactcattcagagatggg
tttgaatcggtcttccccctcagccatcttcagtacttctacccagaagagctggaccag
cttctgtgtggcagtaaagcagacacttgggatgcaaagacactgatggaatgctgcagg
cctgatcatggctatactcatgacagtcgggctgtgaagttcttgtttgagattctcagt
agtttcgataatgagcagcagaggttgtttctccagtttgtgactggtagcccacgtttg
ccggttggaggatttcgaagtttaaatccacctctgacgattgtgcggaagacatttgaa
tcaacagaaaacccagatgacttcttaccatctgtgatgacttgtgtgaactatcttaag
ttgccggactactcaagcattgagataatgcgagacaaactgttgatagcagcaagagaa
ggccaacaatcgttccatctttcctga
DBGET
integrated database retrieval system
