Arvicanthis niloticus (African grass rat): 117722872
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Entry
117722872 CDS
T08817
Symbol
Samd1
Name
(RefSeq) atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117722872 (Samd1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117722872 (Samd1)
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Gene cluster
GFIT
Motif
Pfam:
SAMD1_WH
SAMD1_SHD
SAM_1
SAM_PNT
SAM_2
PTPRCAP
Motif
Other DBs
NCBI-GeneID:
117722872
NCBI-ProteinID:
XP_034378021
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All DBs
Position
18:11548972..11552052
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AA seq
519 aa
AA seq
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MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRVPRGGPA
APPPTPAPPPAPVAAPTRAPRAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAAA
PPAGPRRAPPPAVAAREPPAPPQQQQPPPPQPQPPPEGGAARAGGPARPVSLREVVRYLG
GSGGASGRLTRGRVQGLLEEEAARGRLERTRLGALALPRGDRPGRAPPAASARAARSKRG
GEERVFEKEEEDDDEEEEEEEEDNVSEGSEVPESDRPAGAQHHQINGERGPPSAKERVKE
WSPCGPYQGQDEGRGPAPGSCTRQVFSMTATNKEGGSACVAAAPDSPSPVPLPPGKPALP
GTDGTPFGCPSGRKEKPTDPVEWTVMDVVEYFTEAGFPEQATAFQEQEIDGKSLLLMQRT
DVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGLLG
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gccgcctcgtcgtccgccgcttccccgcactaccaagagtggattctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgcggagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccgccgcggagccaccccacccgccccgccgcgcgtcccccgcgggggccccgcc
gcgccgccgcccacgcccgccccgccgcccgcgcccgtcgccgccccgacccgggcgccc
cgcgcggccgccgccacagcgcccccttctcccggccccgcgcaaccgggtccccgggcg
cagcgggccgcgcccctggccgcgccgccaccagcgcccgccgcgcccccggccgcggcg
cccccagccggcccgcgccgtgcaccgccgcccgccgtcgccgcccgggagccgccggcg
ccgccacagcagcagcagccgccaccgccgcagccacagccgccgccggaggggggcgcg
gcgcgggcgggcggcccggcgcggcccgtgagcctgcgggaagtcgtgcgctacctcggg
ggcagtggcggcgccagcggccgcctcacccgcggccgcgtgcaggggctgctggaagag
gaagcggcgcgaggccgtctggagcgcacccgcctgggagcgctcgcgctaccccgcgga
gacaggccgggacgagcgccgccggccgctagcgcacgcgcggcgcggagcaagagaggt
ggagaagaacgggtgtttgagaaagaagaggaagatgatgatgaagaggaggaggaggaa
gaggaggacaatgtatctgagggctcagaagtgcccgagagtgaccgccccgcaggtgct
cagcaccaccagattaatggagagcggggccctccgagtgctaaggagagggtcaaggag
tggtcgccctgtggaccctaccagggccaggatgaagggcggggaccagcacctggcagc
tgcacacgccaggtgttctcgatgacagctacgaataaagaagggggatcagcttgtgtt
gcagctgctccagattctccatctcctgtgcctttgcctccaggaaaaccagccctacct
gggactgatgggaccccttttggctgtccttctgggcgcaaggagaagccaacggaccct
gtggagtggacagtcatggatgtggtggagtacttcaccgaggcaggcttcccagagcag
gctactgcttttcaagagcaggaaattgatggcaagtctttgttgctcatgcaacggaca
gatgtgctcactggtctgtccatccgcctgggcccagccctgaagatctacgagcaccac
atcaaggtgcttcagcaaggccactttgaggacgatgatcctgatggccttctaggctga
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