Arvicanthis niloticus (African grass rat): 117722996
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Entry
117722996 CDS
T08817
Symbol
Cdh11
Name
(RefSeq) cadherin-11
KO
K06803
cadherin 11, type 2, OB-cadherin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117722996 (Cdh11)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117722996 (Cdh11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
ASFV_J13L
DUF443
RIFIN
Motif
Other DBs
NCBI-GeneID:
117722996
NCBI-ProteinID:
XP_034378225
LinkDB
All DBs
Position
18:complement(29013372..29166564)
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AA seq
796 aa
AA seq
DB search
MKENYCLQAALVCLSMLYHSQAFALERRSHLRPSFHGHHEKGKEGQVLQRSKRGWVWNQF
FVIEEYTGPDPVLVGRLHSDIDSGDGNIKYILSGEGAGTIFVIDDKSGNIHATKTLDREE
RAQYTLMAQAVDRDTNRPLEPPSEFIVKVQDINDNPPEFLHETYHANVPERSNVGTSVIQ
VTASDADDPTYGNSAKLVYSILEGQPYFSVEAQTGIIRTALPNMDREAKEEYHVVIQAKD
MGGHMGGLSGTTKVTITLTDVNDNPPKFPQSVYQMSVSEAAVPGEEVGRVKAKDPDIGEN
GLVTYNIVDGDGIDLFEITTDYETQDGVVKLKKPVDFETKRAYSLKVEAANVHIDPKFIS
NGPFKDTVTVKIAVEDADEPPMFLAPSYIHEVQENAAAGTVVGRVHAKDPDAANSPIRYS
IDRHTDLDRFFTINPEDGFIKTTKPLDREETAWLNITVFAAEIHNRHQEAKVPVAIKVLD
VNDNAPKFAAPYEGFICESDHPKPLSNQPIVTVSADDQDDTANGPRFIFSLPPEIIHNPN
FTVRDNRDNTAGVYARRGGFSRQKQDFYLLPIVISDGGIPPMSSTNTLTIKVCGCDVNGA
LLSCNAEAYILNAGLSTGALIAILACIVILLVIVVLFVTLRRQKKEPLIVFEEEDVRENI
ITYDDEGGGEEDTEAFDIATLQNPDGINGFIPRKDIKPEYQYMPRPGLRPAPNSVDVDDF
INTRIQEADNDPTAPPYDSIQIYGYEGRGSVAGSLSSLESATTDSDLDYDYLQNWGPRFK
KLADLYGSKDTFDDDS
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagaactactgtttacaagctgccctggtgtgcctgagcatgctataccacagc
caggcatttgccctggagcgacgaagccacctgcgaccctcattccatggacaccatgag
aagggcaaggaggggcaggtgctgcaacgctccaagagaggttgggtctggaaccagttc
tttgtgatagaagagtacaccgggcctgaccctgtgcttgtgggcaggcttcattctgac
attgattctggtgatgggaacattaaatacattctctcaggtgaaggagcaggaaccatt
tttgtgattgatgacaaatcagggaacattcatgccaccaagacactggaccgagaggag
agagcccagtacacactgatggctcaggcggtggacagggacaccaacaggccactggaa
ccaccttcagaattcattgttaaggtccaggacattaatgacaaccctccagagtttctg
catgaaacctatcatgccaatgtgcctgagaggtccaatgtgggaacatcagtaattcaa
gtgacagcttctgatgcagatgatcccacctacggaaatagtgccaagttagtgtatagt
atccttgaaggacaaccttacttctcagtggaggcccaaacaggtatcatcagaacagcc
cttcccaatatggacagagaagccaaggaagagtaccacgtggtgatccaggccaaggac
atgggtggacacatgggcggactctcagggacaaccaaagtgacgatcacactgactgat
gtcaacgacaatccaccaaagtttccacagagcgtgtaccagatgtctgtttcagaagca
gctgtcccgggggaggaagtaggaagggtgaaggctaaagacccagacatcggagaaaat
ggcttagtcacatacaatatcgttgatggagacggcatagatctatttgaaatcacaaca
gactatgaaacacaggacggtgtggtgaagctaaaaaagcctgtagattttgaaaccaaa
agagcatatagcttgaaggtggaggctgccaatgttcacattgatccgaagttcatcagc
aatggacctttcaaggacactgtgactgtcaagattgcagtcgaagatgccgacgagcct
cccatgttcttggccccaagttatatccatgaagttcaagaaaatgcagctgctggcact
gtggttgggagagtacatgccaaagacccagatgctgccaacagcccaataaggtattca
attgatcgtcatactgacctcgacaggtttttcacgattaatccagaagatggttttatt
aaaactacgaaacctctagatagggaagaaactgcctggctcaacatcactgtcttcgca
gcagaaattcacaacagacatcaggaagccaaagtcccagtagccatcaaggtcctggat
gtcaatgataatgctcctaagtttgctgctccttatgaaggctttatctgtgagagcgat
caccccaagccactgtcgaaccagccaatagttacagttagtgcagatgaccaggacgac
acagccaatggaccaagatttatcttcagcctaccccctgaaatcattcacaacccaaat
ttcacagtaagagacaacagagataacactgcaggagtatatgcccgacgtggagggttc
agtcggcagaagcaggacttctacctcctgcctattgtgatcagtgatggtggcattcca
cctatgagtagcaccaataccctcactatcaaagtctgtgggtgtgatgtgaatggggca
ctgttgtcctgtaacgctgaagcctacatcttgaatgctggtctgagcaccggggcactg
atcgccattcttgcctgcatcgtcattcttctggtcatcgtcgtgttgtttgtgaccctg
aggaggcaaaagaaagaaccactcattgtatttgaagaagaggatgtccgtgagaacatc
ataacctatgatgatgaagggggtggtgaggaagacactgaagccttcgacattgccacc
ctgcagaatcctgacggtatcaatggattcatccctcgcaaagatatcaaacctgagtat
cagtacatgcctagacctgggctgcgaccagcacccaacagtgtggatgtggacgacttc
atcaacacaagaatacaggaggcagataatgatcccacggcccctccctatgactccatc
caaatctatggttatgagggcaggggttccgtggctgggtccctgagctccttggagtct
gccaccacagattcagacctggactacgactatctacagaactggggacctcgttttaag
aaactagcagacttgtatggctccaaagacacttttgatgatgactcttaa
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