Arvicanthis niloticus (African grass rat): 117722998
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Entry
117722998 CDS
T08817
Symbol
Cdh1
Name
(RefSeq) cadherin-1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04015
Rap1 signaling pathway
anu04371
Apelin signaling pathway
anu04390
Hippo signaling pathway
anu04514
Cell adhesion molecules
anu04520
Adherens junction
anu05100
Bacterial invasion of epithelial cells
anu05200
Pathways in cancer
anu05213
Endometrial cancer
anu05216
Thyroid cancer
anu05218
Melanoma
anu05219
Bladder cancer
anu05226
Gastric cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
117722998 (Cdh1)
04390 Hippo signaling pathway
117722998 (Cdh1)
04371 Apelin signaling pathway
117722998 (Cdh1)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117722998 (Cdh1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
117722998 (Cdh1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117722998 (Cdh1)
09162 Cancer: specific types
05226 Gastric cancer
117722998 (Cdh1)
05216 Thyroid cancer
117722998 (Cdh1)
05218 Melanoma
117722998 (Cdh1)
05219 Bladder cancer
117722998 (Cdh1)
05213 Endometrial cancer
117722998 (Cdh1)
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
117722998 (Cdh1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117722998 (Cdh1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117722998 (Cdh1)
04090 CD molecules [BR:
anu04090
]
117722998 (Cdh1)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
117722998 (Cdh1)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117722998 (Cdh1)
CD molecules [BR:
anu04090
]
Proteins
117722998 (Cdh1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
CADH_Y-type_LIR
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
117722998
NCBI-ProteinID:
XP_034378227
LinkDB
All DBs
Position
18:32689023..32754010
Genome browser
AA seq
885 aa
AA seq
DB search
MGARCRSFSALLLLLQVSSWLCQKSEPEPCRPGFSSEVYTFLVPERHLERGHVLGKVRFE
GCTGRPRTAFSSGDSRFKVAADGVITVKRHLKLHKPETSFLVHAWDSSHRKLSTKVMLKS
MGHHHHRHHHRDPASESRPEVVTFPSFYLGLRRQKRDWVIPPISCPENEKGEFPKNLVQI
KSNRDKETKVFYSITGQGADKPPVGVFIIERETGWLKVTQPLDREAIAKYLLFSHAVSSN
GEAVEDPMEIVITVTDQNDNRPEFIKQVFEGSVAEGALPGTSVMQVSATDADDDVNTYNA
AIAYTIISQDPELPHRNMFTVNRDTGVISVVTSGLDRESYPTYTLVVQAADLQGEGLSTT
AKAVITVLDINDNAPIFNPSTYQGQVAENEVNVPIVTLKVTDDDAPHTPAWDAVYTIVND
PDQQFIVITDPKTNDGILKTAKGLDFEVRQQYILYVKVENEEPFEGSLVPSTATVTVDVL
DVNEAPIFVPAEKRVEVPEDFGVGQEITSYTAREPDTFMEQKITYRIWRDTANWLEIDPD
TGAVLTRAEMDREDTEHVKNSTYTALIIATDDGSPIATGTGTLLLVLSDINDNAPIPEPR
NMQFCQRNPQPHIITIVDPDLPPNTYPFTAELTHGASVNWTIDYNDKDQTSLILQPKKDL
EIGEYKINLKLADNQNKDQVTTLDVHVCDCEGTVNNCMKAGGYAEAGLQVPAILGILGGI
LALLILILLLLLFLRRRTVVKEPLLPPDDDTRDNVYYYDEEGGGEEDQDFDLSQLHRGLD
ARPEVTRNDVAPTLMSVPQYRPRPANPDEIGNFIDENLKAADSDPTAPPYDSLLVFDYEG
SGSEAASLSSLNSSESDQDQDYDYLNEWGNRFKKLADMYGGGEDD
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgggagcccggtgccgcagcttctccgcgctcctgctcctgttgcaggtctcctcatgg
ctttgccagaagtcggagccagagccctgccgtcccggcttcagttccgaggtctacacc
ttcctggtgccggagaggcacctggagagaggccacgtcctgggcaaagtgagatttgaa
ggatgcacgggtcggccaaggacagctttctcttctggagactcccgattcaaagtggca
gcagatggtgtcatcacagtcaagcggcatttaaagcttcataaaccggagacgagtttt
cttgtccatgcctgggactccagtcacaggaaactttctaccaaagtgatgctgaagtcc
atggggcaccaccaccaccggcaccaccaccgtgaccctgcgtctgaatccaggccagaa
gtggtcacgtttcccagcttttacttgggtctcagaagacagaaacgagactgggtcatc
cctcccatcagctgccccgaaaatgaaaagggcgagttcccgaagaacctggttcagatc
aaatccaacagggacaaagaaacaaaggttttctacagcatcactggccaaggagctgac
aaaccccccgttggtgttttcatcattgagagggagacaggctggctgaaagtgacacag
cctctggatagagaagccattgccaagtacctccttttttctcatgctgtgtcatcaaat
ggggaagcagtggaggatcccatggagatagtgatcacagtgacagatcagaatgacaac
aggccagagtttatcaagcaggtctttgagggatccgttgcagaaggcgctcttccaggc
acctccgtgatgcaggtctcagccactgatgcagacgatgatgtcaacacctataacgct
gccattgcctacaccatcatcagccaagatccggagctgcctcacaggaatatgttcact
gtcaacagggacaccggggtcatcagtgtggtcacctccgggctggaccgagagagttac
cctacatacactctggtggttcaggctgctgaccttcaaggcgaaggcttaagcacaaca
gcaaaagctgtgatcactgtcttggatattaatgacaacgctcccatcttcaacccaagc
acgtaccagggtcaagtggctgagaatgaggtcaatgtccctatcgtcacactcaaagtg
actgatgatgatgccccccatactccagcgtgggatgctgtgtacaccatagtcaacgat
cctgatcaacagttcattgtcatcaccgaccccaagaccaacgatggcattctgaaaaca
gccaagggcttggattttgaggtcaggcagcagtacattctgtacgtgaaagtagagaat
gaggaaccctttgaggggtctcttgtcccttccacagccaccgtcaccgtggatgtgtta
gacgtgaatgaagcccccatctttgtacctgcggagaagagagtcgaagtgcctgaagac
tttggtgtgggtcaggaaatcacatcttataccgctcgggagccagacacgttcatggaa
cagaagatcacgtaccggatttggagggacactgccaactggctggagattgaccccgat
accggtgccgttttgacccgggctgagatggacagagaagacacagagcatgtgaagaac
agcacgtatacagctctcatcatcgccacagatgatggctcacccattgccaccggcact
gggactcttctcctggtcctgtcagacatcaacgacaacgctcccatcccagaacctcga
aacatgcagttctgccagaggaacccacagccccatatcatcaccatcgtggatccagac
cttccccccaacacataccccttcactgctgagctaacccacggggccagcgtcaactgg
accattgactataatgacaaagatcaaacatctcttattttgcaaccaaaaaaggactta
gaaattggcgaatacaaaatcaatctcaagcttgcagataaccagaacaaagaccaggtg
accacgttggacgttcatgtgtgtgactgtgaagggactgtcaacaactgcatgaaggcg
ggtggttatgcggaagcaggattgcaagttcctgccatcctcggaatccttggagggatc
ctagccctgctgattctgatcttgctgctcctactgtttctgcggaggagaacggtggtc
aaagagcccctgctgccaccagacgatgacacccgggacaacgtgtattattatgatgag
gaaggaggtggagaagaagaccaggactttgatttgagccagctgcacaggggcctggat
gcccgtccggaagtgacccgaaatgacgtggctcccaccctcatgagtgtgccccagtac
cgtccccgtcctgccaatcctgatgagattgggaacttcattgatgaaaacctgaaggca
gccgacagcgaccccacggcacccccttatgactctctgttggtgtttgactacgagggg
agtggttctgaagctgcctcgctgagctccctgaactcctcagagtcggatcaggaccag
gactatgattatctgaacgagtggggcaaccgattcaagaagctggctgacatgtatggt
ggcggcgaggatgactag
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