Arvicanthis niloticus (African grass rat): 117723021
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Entry
117723021 CDS
T08817
Symbol
Kars1
Name
(RefSeq) lysine--tRNA ligase isoform X1
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117723021 (Kars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anu01007
]
117723021 (Kars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117723021 (Kars1)
Enzymes [BR:
anu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
117723021 (Kars1)
Amino acid related enzymes [BR:
anu01007
]
Aminoacyl-tRNA synthetase
Class II (A)
117723021 (Kars1)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
117723021 (Kars1)
Prokaryotic type
Other AARSs
117723021 (Kars1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
117723021
NCBI-ProteinID:
XP_034378271
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Position
18:complement(37990384..38007729)
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AA seq
624 aa
AA seq
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MLMQAAVRLVRGSLRQTSWAEWGQRELRLGQLAPFTTLHKDKPLSDRRSELKRRLKAEKK
LAEKEAKQKELSEKQLNQSASATNHTADNGVGVEEETLDPNQYYKIRSQAVQQLKVSGED
PYPHKFHVDISLTQFIQDYSHLQPGDHLTDVTLKVAGRIHAKRASGGKLIFYDLRGEGVK
LQVMANSRNYKSEEEFVHINNKLRRGDIIGVEGNPGKTKKGELSIIPQEITLLSPCLHML
PHLHFGLKDKETRYRQRYLDLILNDFVRQKFIIRSKIITYIRSFLDELGFLEIETPMMNI
IPGGAVAKPFITYHNELDMNLYMRIAPELYHKMLVVGGIDRVYEIGRQFRNEGIDLTHNP
EFTTCEFYMAYADYHDLMEITEKMLSGMVKSITGSYKITYHPDGPEGQAYEVDFTPPFRR
ISMVEELEKALGVKLPETSLFETEETRKILDDICVAKAVECPPPRTTARLLDKLVGEFLE
VTCISPTFICDHPQIMSPLAKWHRSKVGLTERFELFVMKKEVCNAYTELNDPVRQRQLFE
EQAKAKAAGDDEAMFIDENFCTALEYGLPPTAGWGMGIDRLTMFLTDSNNIKEVLLFPAM
KPEDKKETAAATETPESTEASPSV
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgttgatgcaagctgctgtcaggcttgttagggggtccctgcgccaaacctcatgggca
gaatggggtcagagggaacttcgactgggccaacttgctcctttcacaacgctccacaag
gacaagccactttctgatagaagaagtgagctgaagaggcgtctgaaagctgagaagaaa
ctggcagagaaagaggccaagcagaaagagctcagtgagaaacagctaaaccagtctgct
tctgccaccaaccatactgctgacaatggtgtgggtgttgaggaggagactctggaccca
aatcaatactacaagatccgaagtcaagcagtccagcagctgaaggtcagtggggaggat
ccgtacccacacaagttccacgtggacatctctctcactcagttcatccaagactacagt
cacctgcagcctggggaccacctgactgacgtcaccctaaaagtggcaggtcgcattcat
gccaagagagcctctgggggaaagctcatcttctatgaccttcgaggagagggagtcaag
ttacaagtcatggccaactccaggaattataaatcagaggaggaatttgttcatattaat
aacaagctgcgccggggagacataattggagttgaggggaatcctgggaaaaccaagaag
ggtgagctgagcatcatcccccaggagatcacactcctgtccccctgcttgcacatgctg
cctcatcttcactttggcctcaaagacaaggaaacaaggtatcgccagagatacttggac
ttgatcctgaacgactttgtgaggcagaaatttatcatccgctctaagatcatcacatat
ataagaagtttcttggatgagctgggatttctagagatcgaaactcccatgatgaacatc
attcctgggggagctgtggccaagcctttcatcacctatcacaatgagctggacatgaac
ttatatatgagaatcgctccagaactctaccataagatgctggtggttggtggcattgac
cgggtttatgaaattgggcgccagttccgaaacgaagggattgatttgactcacaatcct
gagttcaccacctgtgagttctacatggcctatgcagactatcatgacctcatggaaatc
acagagaagatgctgtcagggatggtgaaaagcattacaggcagttacaagatcacctac
cacccagatgggccagaaggccaagcctatgaagttgacttcaccccacccttccgaaga
atcagcatggtagaagagcttgagaaagccctaggtgtgaagctgccagaaaccagtctc
tttgaaactgaagaaactcgaaaaattctggatgatatttgtgttgcaaaagctgttgaa
tgccccccacctcggaccacagccaggctccttgataagcttgttggagagttcctcgaa
gtgacatgcatcagtcccacattcatctgtgatcacccacagatcatgagtcctttggcc
aaatggcaccgctccaaagtgggtctaactgagcgctttgagctgtttgtcatgaagaaa
gaagtatgtaatgcctacactgagctgaatgatcccgtgcggcagcgacagctatttgaa
gaacaggccaaggccaaggctgctggtgatgatgaggccatgttcatagatgagaacttc
tgtaccgccctggaatatgggctgcccccaacagctggctggggcatgggtatcgatcgc
ctcaccatgttcctcacagactccaacaatatcaaggaagtacttctctttcctgccatg
aagcctgaagacaagaaggaaactgcagcagccactgaaaccccagaaagcacagaggcc
agcccctctgtctag
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