Arvicanthis niloticus (African grass rat): 117723058
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Entry
117723058 CDS
T08817
Symbol
Vps35
Name
(RefSeq) vacuolar protein sorting-associated protein 35
KO
K18468
vacuolar protein sorting-associated protein 35
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117723058 (Vps35)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117723058 (Vps35)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
117723058 (Vps35)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
KH_GLD-3_1st
FerA
CENP-O
Imm5
ADIP
Motif
Other DBs
NCBI-GeneID:
117723058
NCBI-ProteinID:
XP_034378325
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All DBs
Position
18:complement(12876123..12912184)
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AA seq
796 aa
AA seq
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MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
ALIDRLALFAHREDGPGIPAEIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
PEDFADEQSLVGRFIHLLRSDDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
FRYKENSQMDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRSR
RESPESEGPIYEGLIL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgcctacaacacagcagtcaccccaggatgagcaggaaaaactcttggatgaagccatc
caggctgtgaaggttcaatcattccagatgaaaagatgcctggacaaaaacaagctgatg
gatgctttgaaacatgcttctaacatgcttggagagctccggacttcaatgttatcacca
aagagttactatgaactttatatggctatttctgatgaactgcactacttggaggtctac
ctgactgatgaatttgctaaaggaagaaaggtggctgatctctatgaacttgtacagtat
gctggaaacattattccaaggctttatctcttgatcacagttggagttgtatatgtcaag
tcatttcctcaatccaggaaagatattttgaaagatttggtagaaatgtgccgtggtgtg
cagcatccgctaaggggtttgtttcttcgaaattatcttcttcagtgtactaggaacatt
ttacctgatgaaggagagccaacagatgaagaaacaactggtgacatcagtgattccatg
gattttgtactactcaactttgcagaaatgaataagctttgggtgcggatgcagcatcaa
ggacatagtcgagatagagaaaaaagagaacgagagagacaagaactgagaattttagtc
ggaacaaatttggtgcgccttagtcagttggaaggtgtaaatgtggaacgttacaaacag
attgttttaacaggcattttggagcaagttgtcaattgtagagatgctttggctcaagaa
tatctcatggagtgtatcattcaggtttttcccgatgagttccatctccagactttgaat
ccttttcttagagcttgtgctgagttacaccaaaatgtaaatgtgaaaaacataatcatt
gctttaattgacagattagctttatttgctcatcgtgaagatggacctggaatcccagct
gagattaaactttttgacatattttcacagcaggtggctacagtgatacagtccagacaa
gacatgccatcagaggatgttgtatctttacaagtctctctcattaatcttgctatgaaa
tgttaccctgatcgtgtggactatgttgataaagttctagaaacaacagtggagatattc
aataaacttaaccttgaacatattgctaccagtagtgcagtttcaaaggagcttaccaga
cttttgaagatacctgttgatacttacaacaatatattaacagtcttaaaattaaagcat
ttccacccactttttgagtactttgactacgaatccagaaagagcatgagctgttatgtg
cttagtaatgttctggattataacacagaaatcgtctctcaggaccaggtagattccata
atgaatttggtgtccacattgattcaggatcagccagaccaacctgtagaagaccccgat
ccagaagactttgctgatgaacagagcctggttggccggtttattcatcttctacgttct
gatgatcctgatcagcagtacttgattttgaatactgcacgaaaacatttcggggctggt
gggaatcagcggattcgcttcacactgccgcctttggtatttgcagcttaccagttggct
tttcgatacaaagagaattctcaaatggatgacaagtgggaaaagaaatgccagaagatt
ttttcatttgctcaccagacgattagtgctttgattaaagctgagctggctgaattacca
ctgagactttttcttcaaggagcgttagctgctggagaaattggctttgaaaatcatgaa
acagtagcatatgaatttatgtcccaggcattttctctatatgaagatgaaataagtgat
tctaaagcacagctggctgctatcactttgatcattggtacttttgagaggatgaaatgc
ttcagtgaagagaatcatgagcccttgagaactcagtgtgcacttgctgcatcaaaactt
ctgaagaaaccagatcaaggccgagctgtgagcacatgcgcacatctcttttggtctggc
cgaaacacagacaaaaatggggaagagcttcatggaggtaaaagggtcatggagtgccta
aagaaggcactaaaaatagcaaatcaatgcatggacccctctctacaagttcagctcttt
atagagattctgaacaggtacatctatttctatgaaaaagaaaatgatgcggtaacaatt
caggtcttgaaccaacttattcaaaagattcgagaagatctcccaaatcttgagtccagt
gaagaaacagagcaaattaacaagcattttcacaacacgttggagcacttgcgctcaaga
cgggaatcaccagagtctgaggggccaatctatgaaggtctcatcctttaa
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