Arvicanthis niloticus (African grass rat): 117723201
Help
Entry
117723201 CDS
T08817
Symbol
Ctcf
Name
(RefSeq) transcriptional repressor CTCF isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117723201 (Ctcf)
03036 Chromosome and associated proteins [BR:
anu03036
]
117723201 (Ctcf)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
117723201 (Ctcf)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117723201 (Ctcf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-C2H2_ZN142
zf-C2H2_7th_ZNF462
zf-met
zf-C2HE
zf-C2H2_6
Zf-C2H2_ZNF451
zf-C2H2_15
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
117723201
NCBI-ProteinID:
XP_034378558
LinkDB
All DBs
Position
18:31744677..31792041
Genome browser
AA seq
734 aa
AA seq
DB search
MEGEAVEAIVEESETFIKGKERKTYQRRREGGQEEDACHLPQNQTDGGEVVQDVNSSVQM
VMMEQLDPTLLQMKTEVMEGTVAPEAEAAVDDTQIITLQVVNMEEQPINIGELQLVQVPV
PVTVPVATTSVEELQGAYENEVSKEGLAESEPMICHTLPLPEGFQVVKVGANGEVETLEQ
GELPPQEDPSWQKDPDYQPPAKKTKKTKKSKLRYTEEGKDVDVSVYDFEEEQQEGLLSEV
NAEKVVGNMKPPKPTKIKKKGVKKTFQCELCSYTCPRRSNLDRHMKSHTDERPHKCHLCG
RAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRHRRYKHTHEKPFKCSMCDYAS
VEVSKLKRHIRSHTGERPFQCSLCSYASRDTYKLKRHMRTHSGEKPYECYICHARFTQSG
TMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYIEQGKKCRYCDAVFHERY
ALIQHQKSHKNEKRFKCDQCDYACRQERHMIMHKRTHTGEKPYACSHCDKTFRQKQLLDM
HFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENGGETKKSKRGRKR
KMRSKKEDSSDSEENAEPDLDDNEEEEEPAVEIEPEPEPQPQPPPQPVAPAPPPAKKRRG
RPPGRTNQPKQNQPTAIIQVEDQNTGAIENIIVEVKKEPDAEPAEGEEEEAQAATTDAPN
GDLTPEMILSMMDR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtgaggcagttgaagccattgtggaggagtctgaaactttcattaaagggaag
gaaagaaagacttaccagagacgccgggaagggggccaggaagaggatgcttgccacctg
ccccagaaccagacagatgggggtgaggtggtccaggatgtcaacagcagtgtacagatg
gtaatgatggaacagctggatcctacccttctccaaatgaagactgaagtaatggagggt
acagtggcacctgaagcagaggctgcagtggacgatacccagatcataaccttgcaggtt
gtaaatatggaggaacagcccattaacataggagagcttcagcttgtccaagtacctgtt
cctgtaactgtacctgttgctactacttcagtagaagaacttcagggggcttatgagaat
gaagtgtctaaagagggccttgcagaaagtgaaccgatgatatgtcacaccttacctttg
cctgaaggatttcaggtggtgaaagtgggggccaatggagaagtggagacacttgagcaa
ggggagcttcctcctcaggaagaccctagctggcaaaaagacccagactatcagccacca
gccaaaaaaacaaagaaaaccaaaaagagcaaactccgatacacagaggagggcaaggac
gtggatgtgtctgtgtatgactttgaggaggagcagcaggagggactgctgtctgaggtc
aatgcggagaaagtggtcggtaatatgaagcctccgaagccaacaaagattaaaaaaaaa
ggtgtaaagaaaacattccagtgtgagctttgtagttacacatgtccgcgacgttcaaat
ttggatcgtcacatgaaaagccacactgatgagagaccacacaagtgccatctctgtggc
agagcattcagaacagtgaccctcctgaggaaccatcttaacacacacacaggtactcgt
cctcacaagtgcccagactgcgacatggcctttgtgaccagtggagaattggtgcggcat
cgtcgttataaacacactcatgagaaaccatttaagtgttccatgtgtgactatgccagt
gtagaagtcagcaaattaaaacgacacattcgctctcatactggagagcgcccgttccag
tgcagtttgtgcagttatgccagcagggacacatacaagctgaaaaggcatatgagaacc
cattcaggggaaaaaccttatgaatgttatatttgtcatgctcggtttacccagagtggt
actatgaagatgcacattttacagaagcacacagaaaatgtggccaaatttcattgtccc
cattgtgacactgtcatagcccgaaaaagtgatttgggtgtccacttgcgaaagcagcat
tcctatattgagcagggcaaaaaatgtcgctactgtgatgctgtgtttcatgagcggtat
gctctcatccagcatcaaaaatcacacaaaaatgagaagcgcttcaagtgcgaccagtgt
gattatgcttgtagacaggagcggcacatgatcatgcacaagcgtacccacacaggggag
aagccttacgcctgcagccactgcgacaagaccttccgccagaagcagctcctcgacatg
cacttcaagcgctatcacgatcccaactttgtccctgcagcctttgtctgttctaagtgt
gggaaaacattcacacgccggaatacaatggcaagacatgcagataactgtgctggtcca
gacggtgtagaaggggaaaatggaggagaaacaaagaagagcaaacgaggaaggaaaaga
aagatgcgatctaaaaaagaagactcctctgatagtgaagaaaatgctgagccggatctc
gatgacaatgaggaggaggaggagcctgctgtagaaattgaacctgagccagagcctcag
cctcagcctccacctcagcctgtagccccagccccaccacctgccaagaagagaagaggg
cgacctcctggaagaaccaaccagcccaaacaaaaccagccaacagccatcattcaggtt
gaagatcagaatacaggtgcaattgagaacattatagttgaagtaaaaaaagagccagat
gctgagcctgcggagggggaagaagaagaggcccaggcagccaccacagatgcccccaac
ggagacctcacgcctgagatgattctcagcatgatggaccggtga
DBGET
integrated database retrieval system
