Arvicanthis niloticus (African grass rat): 117723275
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Entry
117723275 CDS
T08817
Symbol
Farsa
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
117723275 (Farsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
anu01007
]
117723275 (Farsa)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
anu03016
]
117723275 (Farsa)
Enzymes [BR:
anu01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
117723275 (Farsa)
Amino acid related enzymes [BR:
anu01007
]
Aminoacyl-tRNA synthetase
Class II (U)
117723275 (Farsa)
Transfer RNA biogenesis [BR:
anu03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
117723275 (Farsa)
Prokaryotic type
117723275 (Farsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
HTH_11
tRNA-synt_2
MarR_2
tRNA_synthFbeta
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
117723275
NCBI-ProteinID:
XP_034378671
LinkDB
All DBs
Position
18:12413355..12425034
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AA seq
508 aa
AA seq
DB search
MADNPVLELLLRRLEAADGGLDSAELAKQLGVEHQAVVGAVKSLQALGEVIEAELRSAKC
WELTAEGEEIAREGSHEARVFRSIPLEGLVQSELMQLPSGKVGFSKAMSNKWIRVDKSAA
DGPRVFRVVDSIEDEVQRRLQLVQAGQAEKLAEKERNELRKRKLLTEVILKTYWVSKGRG
FSTSVSKQEAELSPEMISSGSWRDRPFKPYNFSARGVLPDSGHLHPLLKVRSQFRQIFLE
MGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTH
SQGGYGSQGYKYTWKLEEARKNLLRTHTTAASARALHRLAQKKPFTPAKYFSIDRVFRNE
TLDATHLAEFHQIEGVIADHGLTLGHLMGVLREFFTKLGITQLRFKPAYNPYTEPSMEVF
SYHQGLKKWVEVGNSGVFRPEMLLPMGLPENVSVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDIEPRASKTQEAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagacaatccggttttggagctgttgctgaggcgattggaggcagctgatggcggc
ctggacagcgcggagctggctaagcagctgggtgtggagcaccaggcggtggtgggcgca
gtcaagagcctccaggctctgggtgaggtcattgaggctgagctccgatctgccaagtgc
tgggagctgaccgctgagggcgaggagattgcccgggagggcagccatgaggcccgtgtg
tttagaagcatccctctcgagggcctggtgcaaagtgagctcatgcaactgcccagcggc
aaggtgggcttcagcaaggccatgtctaacaagtggatccgagtggacaagagtgcagcc
gatgggccccgggtgttccgagtggtggacagtatagaggatgaagtgcagaggcggttg
cagctggtccaggcaggccaggctgagaagctggctgaaaaggaaaggaatgagctccgg
aagaggaaactgctgactgaagtgatcctgaaaacctactgggtgagcaagggcaggggc
ttcagcacaagtgtgtctaagcaggaggcagagctaagcccagagatgatctccagtggc
tcctggagggaccggcccttcaaaccctacaacttctctgcccgtggtgtgctcccagat
agtggccacctgcaccccttactcaaggtccgctcccagttccgacaaatcttcttggag
atggggttcaccgagatgcctacagacaatttcatcgagagctccttctggaactttgat
gcactcttccagcctcagcagcacccagcgcgtgaccagcatgataccttcttccttcga
gacccagctgaagccctgcagcttccaatggactatgtccagcgggtgaaacggacccac
tcccagggtggctacggctcacagggctacaagtatacctggaagctggaagaggcccgg
aaaaacctacttcgcactcacaccacggcagccagcgcccgagcccttcaccgtttagcc
cagaagaagccatttacaccagccaaatacttctctattgatcgtgtgtttcggaatgag
acgctggatgccacacacctggccgagttccaccagattgagggtgtgatagctgaccat
ggtctcaccctgggccacctcatgggtgtgctgagggagttcttcactaagctgggaatc
acgcagttgcgcttcaagccagcctacaacccctacacagagcccagcatggaagtgttc
agctaccaccaaggtctaaagaagtgggttgaagttggcaactctggggtcttccgccct
gagatgctcctgcctatggggctccccgaaaatgtgtctgtcattgcttggggtctctcc
ctggagcgcccaacaatgatcaaatatggcatcaataacatccgagagctggtgggccac
aaggtgaacttgcagatggtatacgacagccctgtgtgccggctggatatcgagcccagg
gcctccaagacacaggaggctgcatga
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