Arvicanthis niloticus (African grass rat): 117723312
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Entry
117723312 CDS
T08817
Symbol
Sart1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117723312 (Sart1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117723312 (Sart1)
04121 Ubiquitin system [BR:
anu04121
]
117723312 (Sart1)
Spliceosome [BR:
anu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
117723312 (Sart1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
117723312 (Sart1)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117723312 (Sart1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Motif
Other DBs
NCBI-GeneID:
117723312
NCBI-ProteinID:
XP_034378747
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All DBs
Position
1:complement(113828278..113837028)
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AA seq
807 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAAGTGGTTEQPPRHREHKKHKHRSSGGGSSGGGERRKRSRER
GGERGSGRRGAEAEARSGAHGRERSQAEPSERRVKREKRDEGYEAAASSKASSGDASSLS
IEETNKLRAKLGLKPLEVNAVKKEAGTKEEPVAADVINPMALRQREELREKLAAAKEKRL
LNQKLGKIKTLGEDDPWLDDTAAWIERSRQLQKEKDLAEKRAKLLEEMDQEFGVSTLVEE
EFEQRRQDLYSARDLQGLTVEHAIDSFREGETVVLTLKDKGVLQEGEDVLVNVNMVDKER
ADKNVELRKKKPDYLPYAEDESVDDLAQQKPRSILAKYDEELEGERPHSFRLEQGGMADG
LRERELEEIRTKLRLQAQSLSSVGPRLASEYLSPEEMVTFKKTKRRVKKIRKKEKEVIMR
ADDLLPLGDQTQDGDFGSRLRGRGRRRVPAVEEEALEDEEKDPVPQPPPSDDTRVENMDI
SDEEDGGALPSESPEVLEEDEAELELQKQLEKGRRLRQLQQLQQLRDSGEKVLEIVRKLE
SRQRGWEEEEDPERKGTIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSAN
GGSESDGEENIGWSTVNLDEEKQHQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLET
TVQKVARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYV
DETGRKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQ
EKQKAQKTPYIVLSGSGKSMNANTITK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgtggagagaaggaagcagccgggacgacggctgcggct
ggtaccgggggcactaccgagcagccgccacggcatcgagagcataagaaacacaagcac
cggagcagcggcggcggcagcagcggcggcggcgaacgacggaagcggagccgcgagcgt
gggggcgagcgcgggagcgggaggcgcggggccgaagccgaggcccgcagcggcgcgcac
ggtcgcgaacgaagccaagcggagccctcggagcggcgcgtgaagcgggagaaacgcgat
gagggctatgaggccgctgctagctccaaagccagctctggagatgcctcatcacttagc
atcgaggagaccaataaacttcgagcaaagttggggctgaaacccttggaagtcaatgct
gttaagaaagaggcgggcaccaaggaggagcccgtggcagccgatgttatcaaccccatg
gccttgcgacagcgtgaagaactacgggagaagctggcagctgccaaagaaaagcgcttg
ctgaaccaaaagttggggaaaataaagacactgggggaggatgacccctggcttgatgat
actgcagcctggatagagaggagccggcagctacagaaagagaaggacctggcagagaag
cgggccaagctactagaggagatggaccaagagtttggtgtgagcactttagtggaggag
gagtttgagcagaggcgacaggacctgtacagtgcccgggacttgcaaggcctcactgtg
gaacatgccattgattcctttcgagaaggagagactgtggtcctcaccctcaaggacaaa
ggggtactgcaggagggggaggatgtactggtgaatgtgaacatggtggacaaggagcgg
gcagacaagaatgtggagcttcggaaaaagaagcccgactacctgccgtatgcggaagat
gagagtgtggacgatctggcacagcaaaaacctcgttctatcctggccaaatatgatgag
gaactagagggcgagcgaccacattccttccgtttggagcagggtgggatggccgatggc
ctgagggagcgagagctagaagaaatccggaccaagctacggctgcaggctcagtctctg
agctctgtagggccccggcttgcttctgagtacctcagtcctgaggagatggtgaccttc
aaaaagaccaaacggagagtgaagaaaatccgaaagaaggagaaggaggtgataatgcgg
gcagatgacttgctgccccttggcgaccagactcaggatggggactttggatccaggctt
cggggtcggggtcggcgccgagttcctgcggtggaggaagaggcccttgaagatgaggag
aaggaccctgtgcctcagccaccaccgtcagatgacactcgcgtagagaacatggatatc
agtgatgaagaggatgggggagctcttccatcggagtccccagaggtgctggaggaagat
gaagcagagctggagctgcagaagcagctggagaaggggcgccggctgcggcagctgcag
caactgcagcagcttcgagacagtggggagaaggtgctggagattgtgaggaaactggag
tctcgccagcgaggctgggaggaggaggaggatcctgagcggaaggggaccatcgtgttc
aatgctacttctgagttctgccgcactctgggggagatccccacctatgggttggctggc
aaccgagaggagcaggaggagcttatggactttgagagggatgaagagcgctcggccaat
ggtggctctgaatcagatggagaagagaacattggctggagcactgtcaacctggatgag
gagaagcaacatcaggatttctctgcttcctctaccaccatcctggatgaggagcccatt
gtgaacagagggctggcagctgccctgctcctgtgtcagaacaaaggactgctggagacc
acagtacaaaaggtggcccgggtaaaggctcccaataagtcactgccctcagcagtgtac
tgcatcgaggataagatggccattgatgacaagtacagccgacgagaggagtacaggggc
ttcacccaggacttcaaggagaaagatggctacaagcctgatgttaagattgaatatgtg
gatgagactggcaggaaactgactcccaaggaggcattccggcagctgtcccaccgcttc
cacggaaagggttcaggcaagatgaagactgagaggcggatgaagaagctggatgaggag
gcgctcctgaagaaaatgagctccagtgacacacccctgggcaccgtggcactgctccag
gagaagcagaaggcccaaaagacaccatacatcgtgctgagtggcagcggcaagagcatg
aatgcgaacaccatcaccaaatga
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