Arvicanthis niloticus (African grass rat): 117723342
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Entry
117723342 CDS
T08817
Symbol
Cdh16
Name
(RefSeq) cadherin-16 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117723342 (Cdh16)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117723342 (Cdh16)
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Motif
Other DBs
NCBI-GeneID:
117723342
NCBI-ProteinID:
XP_034378796
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Position
18:complement(30905716..30914921)
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AA seq
830 aa
AA seq
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MISAWLWLFCLSVIQVFTTEAQHAESLHTEVPENYGGNFPFYILKLPLPLGRDEGQIVLS
GDSGTAVQNTFAVDPDSGFLVATRALDREEKAEYHLQVTLESEDGRVLWGPQLVTVHVKD
ENDQVPQFSQAIYRAQLSQGTRPGVPFLFLEASDGDAPGTANSDLRFHILSQSPPQPLPD
MFQLDPHLGALALSLKGSTSLDHALEETYQLLVQVKDMGDQPSGHQAIATVEISIAENSW
TPLEPVHLAENLRVAYPHSIAQVHWNGGDVRYQLENQPPGPFDVDTEGRIHVIMELDREA
QAEYQLQVRAQNSRGEDYAEPLELQVVVTDENDNAPVCSPHDSTVSIPELSPPGTEVARL
SAEDLDAPGSPNSHIVYQLLSPEPEEGTKNKAFELDRTSGSVTLGTAPLHAGQDILLQVL
AVDLAGSEGGLSSTCEVAVTITDINNHAPVFISSQIGPVSLPEDVKPGALVATLLATDAD
LEPAFRLMDFAIEEGDPEGIFDLSWEPDSDHVQLRLQKNLSYEAAPDHKVVVVVRNREEL
EGPGPGPAATATVTVLVERVIPPLKLEQESYETSIPVSTPAGSLLLTIQPSDPMSRPLRF
SLVNDSEGWLCIKEVSGEIHTAQSLQGAQPGDTYTVLVEAQDTDDPGLSTSATVMVHFLK
ASPVPALTLATGPSRHLCTPRQDYGVVVSGVSEDPDLANRNGPFSFALGPNPTVQRDWRL
QPLNDSHAYLTLALHWVEPGEYMVPVVVHYDAQMWQLQVQVIVCRCNVEGQCMRKVGRMK
GMPTKLSAVGVLLGTLAAIGFILILVFTHLALSRKDLDQPADSVPLKAVM
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgatctctgcctggctgtggctattttgcctctctgttattcaggttttcaccactgaa
gcccagcatgctgaaagcctgcatacggaagtccccgaaaactatggtggaaatttccct
ttttacatactcaagctaccactgcccctagggagggatgaaggccagattgtcctatca
ggagactcaggcacagcagttcaaaacacctttgctgtggatccagattctggctttcta
gtggcaacaagggctctggaccgggaggaaaaggcagaataccatctacaggtcaccttg
gagtctgaggatggacgtgtcttgtggggtccacagcttgtgactgtacatgtgaaagat
gagaatgaccaggtaccccaattctcccaggccatctacagagctcagctgagccagggc
accaggcctggagttcccttcctcttccttgaggcttctgatggggatgcaccaggcaca
gctaactcggaccttcgcttccacattctgagccagtccccacctcagcctttaccagat
atgttccagctggaccctcatctaggggctctggcccttagtctcaagggaagcaccagc
ctagaccatgccctggaagagacttaccagctattggtacaggtcaaggacatgggtgac
cagccttcaggccatcaggctattgcgaccgtagagatctccatagcagagaacagctgg
acacccctagagcctgttcacctggcagagaatctcagggttgcttacccacacagcatt
gctcaggtgcactggaatggaggagatgtgcgttatcagctggagaaccagcctccagga
cctttcgatgtggatacagaggggagaatccatgtaattatggagctggaccgagaggcc
caggctgagtaccagctccaagtccgagctcagaattctcgtggtgaggactacgcagaa
cccctggagttgcaggtggtggtgacggatgaaaatgacaatgcacctgtctgctcccca
catgactcaacagtcagcatccctgagcttagccccccaggaactgaagtggccaggctc
tcagcagaggatttggacgcccctggatcacccaattcccacattgtgtatcagttgttg
agccctgagcctgaggaggggactaaaaacaaagccttcgagttagatcggacctcaggc
agtgtaacgctgggaactgccccactccatgctggccaggatatcctgcttcaggtgctg
gctgttgacttagcaggatcagagggtggcctcagcagcacatgtgaggttgcagtcacg
atcacagacatcaacaatcatgcccctgtgttcatcagttcccagattgggcctgtaagt
cttcctgaggatgtaaagcctggggctctggtggccacactcttggccactgatgctgac
cttgagcctgccttccgccttatggacttcgccattgaagaaggagacccagaagggatc
tttgacctgtcctgggagccagactctgaccatgtccagctcagactccagaagaacctc
agctacgaggccgctcctgatcacaaggtggtggtggttgtgcggaacagggaagaactg
gagggcccaggtccaggccctgcagccacggccacggtgactgtactggtggagagggtg
ataccacccctcaagctggagcaggagagctatgaaaccagcatcccagtcagcacccca
gctggctctctcttgctgaccatccagccctcagaccccatgagcagacccctcaggttc
tccctggtcaatgactcagagggctggctctgcatcaaggaggtgtctggggagatacat
acagcccagtccctgcagggtgcccagcctggagacacatacacagtgcttgtggaggcc
caagacacagatgatccaggactgagcacttctgccactgttatggtccacttcctgaag
gcctctcctgtcccagcattgactctggccactgggcccagccgacacctctgtacacct
cgccaagactacggtgtggttgtgagtggggtcagtgaggaccctgacctggccaacagg
aatggtcccttcagttttgctcttggtcccaatcccactgtgcagcgggattggcgcctc
cagcctcttaatgattctcacgcctacctcaccttggcactgcattgggtagagcctggt
gaatacatggtacctgtggttgtccactatgatgcccaaatgtggcaactccaggtccaa
gtgatcgtgtgccgttgcaatgtggagggtcaatgcatgcgcaaggttggtcgcatgaag
ggaatgcccacgaagctgtcagcagtgggtgtcctcttggggaccctggcagcgataggc
ttcattctcattcttgtcttcacacacctggccctgtcaaggaaggacctggatcagcca
gcagacagtgtgcccctgaaggcagttatgtga
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