Arvicanthis niloticus (African grass rat): 117723346
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Entry
117723346 CDS
T08817
Symbol
Cdh3
Name
(RefSeq) cadherin-3 isoform X1
KO
K06796
cadherin 3, type 1, P-cadherin
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04514
Cell adhesion molecule (CAM) interaction
anu04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117723346 (Cdh3)
04519 Cadherin signaling
117723346 (Cdh3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
anu04515
]
117723346 (Cdh3)
Cell adhesion molecules [BR:
anu04515
]
Cadherins
Major cadherins
117723346 (Cdh3)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_FAT4_N
Ig_CLSTN
BACON_2
Motif
Other DBs
NCBI-GeneID:
117723346
NCBI-ProteinID:
XP_034378804
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All DBs
Position
18:32596979..32645657
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AA seq
822 aa
AA seq
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MGLLSGPLVFLLLLLQVCWLCSVVSEPFREGFIGDAGVTLEVRGTDLELSQALGKVALAG
HEVHHADNAEIITLNRGTVRGGKGVMSSPPTRILRRRKREWVMPPISVPENGKGPFPQKL
NQLKSNKDRGTKIFYSITGPGADSPPEGVFTIEKETGWLLLSMPLDREKMVKYELFGHAV
SENGASVEEPMNISIIVTDQNDNKPKFTQDTFRGSVLEGVMPGTSVMKVTATDEDDAINT
YNGVVAYSIHSQEPKEPHDLMFTIHKSTGTISVISSGLDREKVPEYRLTIQATDMDGEGS
TTTAEAIVQILDANDNAPEFEPQKYEAWVPENAVGHEVQRLTVTDLDAPNSPAWRATYHI
VGGDDGDHFTIATHPETNQGILTTKKGLDFEAQNQHTLYIEVTNEAPFAVKLPTATATVV
VHVEDVNEAPVFVPPSKVIEAQEGISIGELVCIYTAQDPDKEEQKISYSILRDPASWLAV
DPESGQITAAGILDREDEQFVKNNVYEVMVLATDNGNPPTTGTGTLLLTLTDINDHGPIP
EPRQIIICNQSPVPQVLNITDKDLSPNSSPFQAQLTHDSDIYWMAEVSEKGDTVALSLKK
FLKQDTYDLHLSLSDHGNREQLTMIRATVCDCHGQVLNDCPRPWKGGFILPILGAVLALL
TLLLALLLLVRKKRKVKEPLLLPEDDTRDNVFYYGEEGGGEEDQDYDITQLHRGLEARPE
VVLRNDVAPTFIPTPMYRPRPANPDEIGNFIIENLKAANTDPTAPPYDSLLVFDYEGSGS
DAPSLSSLTSSASDQDQDYNYLNEWGSRFRKLADMYGGGEDD
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggcttcttagtgggcctctcgtcttcctgctcctcctgctccaggtttgctggcta
tgcagcgtggtctccgagcccttccgggagggcttcatcggggatgctggagtgaccttg
gaagtgagaggaactgacctggagttgagccaagcgctgggaaaagtagcactggctgga
catgaagtgcaccatgcagacaatgcagaaatcattacactgaatagggggacagtccgg
ggagggaagggtgtgatgagctccccacccacacgcatcttacggagacgaaagagagag
tgggtgatgccaccaatatcggtccccgagaatggcaagggtcctttccctcagaagctg
aatcagctcaaatctaataaggacagaggcaccaagattttctacagcatcactgggcct
ggagcagacagtccccctgagggagtcttcaccatagagaaggagacaggctggctgctg
ttgagtatgccactggacagggagaagatggtcaagtatgagctttttggccacgctgta
tccgagaatggtgcctctgtagaggaacccatgaacatatccatcattgtgacagaccag
aatgacaacaagcccaaattcactcaagataccttcagagggagtgttctggagggggtg
atgcctggcacttctgtgatgaaggtgacggccacagatgaggacgatgccatcaatact
tacaatggggtggtggcttactccatccatagccaagaaccaaaagagccccacgacctc
atgttcaccattcataaaagcacggggaccattagcgtcatttccagtggcctggaccga
gagaaagtccctgagtacagactgaccatccaggccacagacatggatggagagggctcg
accacaactgcagaggccatagtgcaaatccttgatgccaatgataacgctccagagttt
gagccgcagaagtatgaggcttgggtgcctgagaacgcagtgggccatgaggtacagagg
ctgacagtgactgatctggatgcccccaactcaccagcatggcgtgccacctaccacatc
gtgggaggtgacgatggggaccatttcaccatcgccactcacccagagaccaaccaaggc
atcctgacaaccaagaagggtttggattttgaggctcagaaccaacacaccctgtacata
gaagtgaccaacgaggccccctttgcagtgaagctcccaactgccactgctaccgtggtg
gtccatgtggaagacgtcaatgaggcccctgtgtttgttccaccttccaaggtcattgag
gcccaggaaggcatctctattggggaactggtctgcatctatacggcacaggacccagac
aaggaggagcagaagatcagctacagcatcctgagagacccggccagctggcttgctgtg
gaccccgaaagtggtcagataactgccgcaggcatcttagatcgggaggatgagcagttt
gtgaaaaacaatgtctacgaagtcatggttttggccacagacaacggaaaccctcccacc
accggcactgggaccctcctgctaacacttactgacatcaatgaccatggcccaatccct
gaaccccgtcagatcatcatctgtaaccaaagtcctgtgcctcaagtgctgaacatcaca
gacaaggacctgtcccccaactcctcccctttccaggcccagctaacacatgattcggat
atctactggatggcagaagtcagcgagaaaggagacaccgtggccttgtccctgaagaag
ttcctgaagcaagacacatatgacttgcacctttccttgtctgaccatggcaacagggaa
cagctaaccatgatccgggccactgtgtgtgactgccacggccaagtgttgaatgactgc
cccagaccctggaagggtggtttcatcctccccatcctgggtgctgtcctggctttgctg
acccttctgctggcactcctcctgttggtgagaaagaagaggaaagtcaaagagcccctt
ctgctcccagaggatgacactcgtgacaatgtcttctattatggagaagagggtggtggc
gaggaggaccaggactatgacatcacccaactccaccggggactcgaggccaggcctgag
gtggttctccgcaacgacgtggcaccaaccttcatccccacccccatgtaccgtccccgg
cctgccaacccagatgaaatcggcaacttcatcattgagaacctgaaggctgccaacaca
gaccctacagccccgccctacgactccctgctggtgtttgactacgagggcagcggctct
gatgctccctccctgagctctctcacctcctccgcctccgaccaggaccaggactacaac
taccttaatgagtggggaagtcgtttcagaaagctggcggacatgtatggtggcggtgag
gatgactag
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