Arvicanthis niloticus (African grass rat): 117723426
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Entry
117723426 CDS
T08817
Symbol
Nup133
Name
(RefSeq) nuclear pore complex protein Nup133
KO
K14300
nuclear pore complex protein Nup133
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117723426 (Nup133)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
117723426 (Nup133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
117723426 (Nup133)
03036 Chromosome and associated proteins [BR:
anu03036
]
117723426 (Nup133)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117723426 (Nup133)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
117723426 (Nup133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_C
FSAP_sig_propep
Peptidase_M41
DUF6216
Motif
Other DBs
NCBI-GeneID:
117723426
NCBI-ProteinID:
XP_034378940
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All DBs
Position
18:complement(49594763..49642766)
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AA seq
1155 aa
AA seq
DB search
MFPAVSSPRTPGPGTRRGPLVGIGPASTPRASRRGLSLGSAVNSPVLFSPVGRRSSVSSR
GTPTRIFPHHSISESVNYDVRVFGSSLPVKIMEALTMAEADDQLSVHIDEGGWACLVCKE
KLLVWKIAMSPVTKLSVCKELQLPPSDFHWSADLVALSYAATSGEVHSVQAVSVMVATKE
GSIRYWPSLAREDTYSDSCVDLGGEKMCRFLTAVQGGSFILSSVGSQLIRLVPESSGKIH
QHVLPQGQGMLSGIGRRVSSLFGILSPTSDLMLASVLWDRGRSSFYTLTSSNISRWELDD
FSEKQAQSWDMHRALKESIADAIWGSESNYEAIKEGVNIQYLDLKQNCDGLLILAAAWHL
GDSPCLIYYSVITVEDNGNQMSDAVTVEVTQYNPPFQSEDLITCRLMVPNFSSQVTYLYM
ENAVFVCSTGTGKFSLPQEKIVFDTQGDGILGAGSCGGVPILFSRNSGLVSITPRENVSL
LAEDLEESLASSVGGRGSESMVFETTTKNETVAHEDKTKLLKAAFLQYCRKDLGRAQMMA
DELFSSHTDLESDSELDKAVTQISVDLIDDYPASDPRWAESVPQEAPGLSNTSLIILHQL
EDKMKAHCLLVDFLHQVGLFRRLGSYPIRGTPMTTRLLLCEHAEKLSAAITLKNHHSRLP
DLVNAAILLTLSKRECEVPTSLTPADVFFREVSQVDTICECLLEHEEQVLRNVALISQEW
ADVAVNVNMVLKDMLQAATHYRLNKSSMYSREEPLGKEPEYVPWTATSGPSGIRTAIVRQ
HGIILKTVYPQADSNLRSIVMEQLVALIDCFLDSYVSQLKSLEKSSDQERYSSLEVEYLQ
KRSELLSPLLTLGQYPWAASLAEKYCDFDILVQMCEQTDNQARLQRYMTQFADQNFSDFL
FRWYLEKGKRGKLLSQPTSQHGQLANFLQAHEHLSWLHEINSQELEKAHTTLLGLANMET
RYFAKKKTLLGLSKLAALASDLSEDTLHEKIEAMAEQERFLLHQETLPEQLLTERQLSLS
AMPVLTAPQLISLYICEENRRANEYDFKKALDLLEYIDEEEDVSIDDLKLEILCRALQRD
DWSGSDGKDDPIEVSKDSVFVKILQKLIKDGIQLSEYLPEVKDLLQAEQLGSLKSNSYFE
FVLKANYEYYVQGQM
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagccgtctcctctccgcgaaccccggggccagggacccgacggggtccgcta
gtcggaatcgggcccgcgtccacgcctagagcgagcaggaggggtctgtctctggggtct
gcagttaattcgcctgtgctgttctcgccggtaggccggcgcagctcggtgagctctaga
ggaacacctactcggatattcccccaccactccatatcagagtctgtgaactacgatgtg
agagtgtttggatcatctctccctgttaagatcatggaagccctgacaatggctgaggcc
gacgatcagctctctgtccacatcgatgaaggtgggtgggcctgcctggtatgcaaagag
aagctcctggtttggaagattgctatgtcgcctgtcactaagttgtctgtttgcaaagaa
ctccagctgccccctagcgatttccactggagcgctgacctggtggcactgtcgtatgct
gcgacctcaggtgaagtacattctgttcaggctgtttctgtcatggttgctaccaaagag
gggtccatccgctactggcccagcctcgccagggaagacacctactcagactcctgtgtg
gatttgggaggcgagaagatgtgcaggttcctgacagcagtgcagggaggaagtttcatc
ctgtcctccgtggggagccagttgattcgcttggttcccgaaagctcaggaaagattcat
cagcatgtcctgccccagggtcaaggcatgctctcagggattggccggagggtgtcttcc
ctttttgggattctgtcccctaccagtgacctcatgctggccagtgttctgtgggacaga
ggaagatcaagtttctacaccctgacaagttcaaacatcagcaggtgggaactggatgac
ttttcagagaagcaggctcagagctgggacatgcacagagccctgaaggagagcatcgcc
gatgcgatttgggggtctgagagtaactatgaagccattaaagaaggggtcaacattcag
tatttggacttgaaacaaaactgcgatgggctcctgattttggcagcagcatggcacctg
ggagacagcccctgtcttatctattactctgtgatcacagtggaagacaatggtaaccag
atgtcagatgcagtcaccgtggaagtgactcagtataacccacctttccagtctgaagac
ctgattacatgtcgattgatggtaccaaacttttcaagccaggtgacctatctttacatg
gagaatgctgtctttgtgtgctccacgggaactgggaagttttctcttcctcaggagaaa
attgtctttgatacacaaggagatggcattttgggtgctggctcctgtggcggtgttcct
atccttttctctaggaacagtggtctggtgtctatcactccaagggaaaatgtatccctg
ttagcagaagacctggaagaatctctggcctcttcagttggtggacggggcagtgagagt
atggtttttgagaccaccacaaaaaacgaaactgtagcccatgaagacaagacaaaactg
cttaaagctgcatttctacagtactgcaggaaagatttgggccgagctcagatgatggct
gatgagctgttttcctctcataccgacttggagtcggattctgagctagacaaggctgtg
actcagatcagcgtggacctcatagatgactacccagcctcagacccacgctgggcagag
tctgtcccccaggaagcccctgggctgagcaacacctcgctgatcattttgcaccagctg
gaggacaagatgaaagctcactgcctcttggtggacttccttcaccaagtcggcttgttt
agacgtctgggctcttatccaatcagagggacacccatgaccacccgactgctgctctgt
gaacatgcggaaaagctgtcagctgccatcacactcaaaaaccatcactctcggctgcca
gacctggtgaacgcggctatcctgctcaccctgagcaagagggagtgtgaggtgcccacc
agcctgacccctgccgatgtcttctttcgagaggtgtcccaagtggacactatctgcgag
tgtctcctggagcatgaggaacaagtcctgcgcaatgttgctttgatctctcaggaatgg
gcagatgtggcggtcaatgtcaacatggtcctcaaggacatgctacaagctgccactcat
taccgcctaaacaagagctctatgtacagtcgggaagagccactagggaaggagccagag
tatgtgccgtggacagccacaagtggtccatctgggatccgcacagcaatcgtgcgccag
catgggatcatcctgaagacagtataccctcaggctgatagcaatctccggagcatcgtg
atggagcagcttgtggcgctgattgactgcttcctggatagttacgtttctcagctgaaa
tctctagagaaatccagtgaccaagaaagatacagcagtctggaggtggaatacctgcag
aaaagatcggagctcctctctccccttctcacactaggccagtacccatgggcagcttct
ctggcagagaagtactgtgactttgatatcctggttcagatgtgtgaacagacagacaac
caggcccgactccagcgctacatgacccagtttgctgaccagaatttttcagactttctc
tttcgttggtacctggagaaaggaaagaggggcaaattgctgtctcagcccacttctcag
catggacagttggcaaactttttgcaagcgcatgagcatctcagctggttacatgaaatt
aatagtcaagaattagaaaaggctcatacaacactgctaggtttggcaaatatggaaact
cgttactttgcaaagaaaaaaacccttcttggcttgagcaaactggcagcgttggcttca
gacctttcagaggacacgctacacgagaagatcgaagccatggctgagcaagagcgcttc
ctgctacaccaggagaccctgccagagcagctgctgaccgagagacagctgagtctcagt
gcaatgcccgtgttgaccgcaccacagctaatcagtctgtacatctgcgaagaaaacaga
agagccaacgagtatgatttcaagaaagccttggacttactggagtacatcgatgaggaa
gaagacgtgagcatcgatgacctgaagctggagattctgtgcagagccctgcagagagac
gactggtctggttcagatggcaaagacgatccaattgaagtgtccaaagacagtgtgttt
gtgaagattttgcagaaacttataaaagatggcatccagctcagcgaatacttgccagag
gtgaaggacctactgcaagcagagcagctgggaagcctcaagtccaactcttactttgag
tttgttctaaaagcaaattatgagtattatgttcaaggacagatgtga
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