Arvicanthis niloticus (African grass rat): 117723434
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Entry
117723434 CDS
T08817
Name
(RefSeq) Y-box-binding protein 3-like
KO
K06099
cold shock domain protein A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117723434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117723434
03041 Spliceosome [BR:
anu03041
]
117723434
Transcription factors [BR:
anu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
117723434
Spliceosome [BR:
anu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117723434
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
OB_RNB
Rho_RNA_bind
Motif
Other DBs
NCBI-GeneID:
117723434
NCBI-ProteinID:
XP_034378944
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All DBs
Position
18:complement(278482..461409)
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AA seq
279 aa
AA seq
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MSEAGEATTCDTTLPQAADPAPKSPAASGTPQAPAPAAPLAGSPGRDAAPRPAPASSAPV
GSEDSEKKVLATKVFGTVKWFNVRNGYGFINRNDTKEDVFVHQTAIKKNNPRKYLRSVGE
GEIVEFDVVTGKGGPKATNVTGPDGVPVEGSHYAVRRRPPHNAGEIRQMKDGVLKGTQLL
VHQNPTYRPRFHRGPAHPCTSPYRSLQVHIFVVNSKENVSVVDNMENVIVLKNGEDIFVE
HTKGEEDIFVVDIEEDIAVVGSGEDFPVVDIAKDFLRVE
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccacctgcgacaccacgctcccgcaggccgctgaccct
gcgcctaagagccctgcggccagcggcacgccccaggccccggcgccagctgcgcccctc
gcggggagccctggcagagacgcagcccccagacccgccccggcctcttcagctcccgtg
ggcagcgaggactcggagaagaaagttctcgccaccaaagtctttggcactgtcaaatgg
ttcaacgtcagaaatggatatggatttataaaccgaaatgacaccaaagaagatgtgttt
gtacaccagactgccatcaagaagaataatccacgcaagtatctgcgcagtgtgggggag
ggagaaattgtagagtttgatgtggttacaggaaaagggggtcctaaagcaacaaatgtg
actggcccagatggagttccagtagaagggagccactatgctgtgcgccgtagacctccc
cataatgctggtgagattagacagatgaaagatggagtcctcaagggaacacaactcctg
gtccatcagaatccaacctaccgcccgaggttccacaggggacccgctcacccatgcacg
agcccatatcgttccctacaggtgcacatctttgtggtaaacagtaaggagaatgtctct
gtggttgacaatatggagaatgtcattgtgcttaaaaatggggaggacatttttgtggag
cacactaagggtgaggaagacatctttgtagtggatattgaagaggacatcgctgtagtg
ggcagtggggaggacttccctgtggtggacattgccaaggatttccttcgggtggaatga
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