Arvicanthis niloticus (African grass rat): 117723511
Help
Entry
117723511 CDS
T08817
Symbol
Irx5
Name
(RefSeq) iroquois-class homeodomain protein IRX-5
KO
K24889
iroquois-class homeodomain protein IRX
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117723511 (Irx5)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117723511 (Irx5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117723511
NCBI-ProteinID:
XP_034379027
LinkDB
All DBs
Position
18:19726655..19730387
Genome browser
AA seq
485 aa
AA seq
DB search
MSYPQGYLYQPSASLALYSCPAYSTSVISGPRTDELGRSSSGSAFSPYAGSTAFTAPSPG
YNSHLQYGADPAAAAAAAFSYVGSPYDHTPGMAGSLGYHPYAAPLGSYPYGDPAYRKNAT
RDATATLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTP
RNRSEDEEEEENIDLEKNDEDEPQKPEDKGDLEGPEAGGAEQKAAAGCERLQGPLSPAGK
ETEGSLSDSDFKESPSEGRHDELPRPPRAGEPSPAGPVTARLAEDAGPHYPASAPAPGPH
PSAGELPPGSGGSSVIHSPPPPPPPPPPAVLAKPKLWSLAEIATSSDKVKDGGGGSEGSP
CPPCPGPMSGQTLGGSRASPAPAPARSPSAQCPFPGGTVLSRPLYYTAPFYPGYTNYGSF
GHLHGHPGPGPGPTAGPGSHFNGLNQTVLNRADVLAKDPKMLRSQSQLDLCKDSPYELKK
GMSDI
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcctacccgcagggctacttgtaccagccgtccgcctcgctggcgctctactcgtgc
cccgcatacagcaccagcgtcatttcggggccccgcacggatgagctcggccgctcttct
tcgggctccgcattctcaccctacgctggctccactgccttcacggctccctcgccgggc
tacaactcgcacctccagtacggcgccgacccagcggctgcggccgccgccgccttctcg
tacgtgggctctccctacgaccacactcccggtatggcgggttccttgggatatcaccct
tacgcagcacctctgggctcctatccttatggggaccccgcgtaccggaagaacgccact
cgggacgccacagccaccctcaaggcctggctcaacgagcaccgcaagaacccgtacccc
accaagggtgagaagattatgctggccatcatcaccaagatgaccctcacccaggtgtcc
acctggttcgccaacgcgcgccggcgtctcaagaaggagaacaagatgacgtggacgcca
cggaaccgcagcgaggacgaggaggaggaggagaacatcgatctggagaagaacgacgag
gacgagccacagaagcccgaggacaagggcgacctcgagggccccgaagcaggaggagca
gagcagaaggcggctgcgggctgcgaacggttgcaggggccgctcagccccgccggcaag
gagacggaaggcagcctcagcgactcggattttaaggagtcgccctcggaaggccgccac
gatgagctgcccaggcccccgcgcgcgggcgagccctccccggctgggcctgtcaccgct
cgtctggcggaggacgcgggtcctcactaccccgcgagtgcgccggcgcccggcccgcac
ccatcagccggagagctgccccccggctcgggaggatcttcagtcatccactcgccaccg
ccgccacctccgccaccgcctccggccgtgctagccaaacccaaactgtggtctctggca
gagatagccacatcctcggacaaggtcaaggacgggggcggagggagtgagggctctccg
tgcccaccgtgccccgggcccatgagcgggcaaacccttggaggcagccgagcgtctcct
gccccagcgcccgcacgctcaccctccgcgcagtgtccctttcctggcgggacggtgcta
tcccggcctctctactacaccgcgcccttctatcccggctacacgaactatggctccttc
ggacatcttcatggccacccagggccagggccaggccctacagcgggccctggctctcat
ttcaatggattaaaccagacggtgttgaatcgtgcagacgttttggctaaagacccgaaa
atgttgcggagccagtctcagctagacctgtgcaaagactccccctatgaattgaagaaa
ggtatgtccgacatttaa
DBGET
integrated database retrieval system
