Arvicanthis niloticus (African grass rat): 117723739
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Entry
117723739 CDS
T08817
Symbol
Ppwd1
Name
(RefSeq) peptidylprolyl isomerase domain and WD repeat-containing protein 1 isoform X1
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
anu03041
]
117723739 (Ppwd1)
03110 Chaperones and folding catalysts [BR:
anu03110
]
117723739 (Ppwd1)
Enzymes [BR:
anu01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
117723739 (Ppwd1)
Spliceosome [BR:
anu03041
]
Complex C
Other components
PPlases
117723739 (Ppwd1)
Chaperones and folding catalysts [BR:
anu03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
117723739 (Ppwd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_THOC3
Beta-prop_WDR3_2nd
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_Vps41
PEP5_VPS11_N
DUF505
Motif
Other DBs
NCBI-GeneID:
117723739
NCBI-ProteinID:
XP_034379160
LinkDB
All DBs
Position
19:49392109..49416542
Genome browser
AA seq
646 aa
AA seq
DB search
MAAESASDSQLRRRRRRDPEGSEKTEFSEREPALAVAGSEENEDENEERWVGPLPVEATL
AKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVVCTKTDFIITASHDGHVKFWKKIE
EGIEFVKHFRSHLGIIESIAVSSEGALFCSVGDDKAMKVFDVVNFDMINMLKLGYFPGQC
EWIYCPGDAISSVAASEKSTGKIFIYDGRGDNQPLHIFDKLHVSPLTQIRLNPVYKAVVS
SDKSGMIEYWTGPPHEYKFPKNVSWEYKTDTDLYEFAKCKAYPTSICFSPDGKKIATIGS
DRKVRIFRFLTGKLMRVFDESLSMFTELQQMRQQLPDMEFGRRMAVERELEKVDAVRLIN
IVFDETGHFVLYGTMLGIKVINVETNRCVRILGKQENIRVMQLALFQGIAKKHRAAATIE
MKASENPVLQNIQADPTIVCTSFKKNRFYMFTKREPEDTKSADSDRDVFNEKPSKEEVMA
ATQAEGPKRVSDSAIVHTSMGDIHIKLFPVECPKTVENFCVHSRNGYYNGHTFHRIIKGF
MIQTGDPTGTGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTP
WLDNKHTVFGRVTKGMEVVQRISNVKVNPKTDKPYEDVSIINITVK
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgagagtgctagcgattcgcagctgaggagaagaaggcgccgggacccagag
ggatcagaaaaaacggaatttagcgagcgagaaccggcactggcagtggcggggagcgaa
gaaaatgaggacgagaatgaagagcgctgggtcgggcctttaccggtagaggcaacactt
gccaagaagaggaaagttctagaattcgaaagagtctatcttgataatcttcccagtgcg
tccatgtatgagcgcagttacatgcacagagatgttatcacacatgtggtatgcaccaaa
acagattttattatcaccgccagtcatgatgggcatgttaaattttggaaaaaaatagaa
gaaggaattgagtttgttaaacattttcgtagtcaccttggaattattgagagtattgca
gttagctctgagggagcattgttctgttctgttggtgatgataaagcaatgaaggtgttt
gatgtagtgaactttgacatgatcaatatgctgaagcttggctattttcctggacaatgt
gagtggatatattgcccaggagatgccatatcatcagttgctgcttctgagaagagtaca
ggaaaaattttcatttatgatggtcgaggagataaccagccacttcatatttttgacaaa
ctccatgtatcccctcttactcaaataagactaaacccagtttacaaagcagtggtgtct
tctgacaaatccggaatgattgagtactggactggacctccgcatgaatataaattccct
aaaaacgtgagctgggagtataaaacggacacagatttatatgaatttgccaaatgtaag
gcatatccaaccagcatttgcttttcacctgatgggaagaaaatagcaaccattggatca
gacagaaaagttagaattttcaggtttttaactggaaaactcatgagggtctttgatgaa
tcattaagtatgtttactgaactacagcagatgaggcaacaactaccagacatggaattt
ggccggcgaatggctgtggaacgtgagctggagaaagtggatgctgtaaggttaattaat
atcgtttttgatgaaactggacacttcgtgctgtatggaacaatgctgggcattaaagta
ataaatgtagaaacaaatagatgtgtgcggatcttaggcaagcaagagaacattagagtg
atgcagctggctttgtttcagggaatagccaaaaagcatcgagctgcagctaccatagag
atgaaagcttcggaaaaccctgttcttcagaatattcaagcagacccaacaatagtctgt
acatctttcaaaaagaatcgattttatatgtttaccaaacgagaaccagaagatacaaaa
agtgcagattctgacagagatgtttttaacgagaaaccttctaaagaagaagtcatggca
gctactcaggctgaagggcccaagcgagtttcagatagtgccattgtccacacaagcatg
ggggacattcacatcaagctttttcctgtggagtgtcccaagactgtggaaaacttctgt
gttcacagcagaaatggttattataatgggcatacattccaccgcataattaagggcttc
atgattcagacaggagatccaacaggtactggtatggggggagaaagcatctggggagga
gagtttgaggatgaattccactcaacattacgacatgacagaccgtacacactcagcatg
gccaatgctggatcaaatacaaacggatcccagtttttcataacggtagtaccaacacct
tggcttgataataagcataccgtgttcggacgagtgactaaaggaatggaggttgtacag
aggatttccaatgttaaagtcaatcccaaaaccgataagccttacgaggatgtcagcatc
ataaatatcactgtcaagtaa
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