Arvicanthis niloticus (African grass rat): 117723743
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Entry
117723743 CDS
T08817
Symbol
Irx1
Name
(RefSeq) iroquois-class homeodomain protein IRX-1
KO
K24889
iroquois-class homeodomain protein IRX
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117723743 (Irx1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117723743 (Irx1)
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GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Dicty_REP
MRP-S32
Motif
Other DBs
NCBI-GeneID:
117723743
NCBI-ProteinID:
XP_034379170
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Position
19:3008299..3013825
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AA seq
480 aa
AA seq
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MSFPQLGYPQYLSAAGPGAYGGERPGVLAAAAAAAAAASSGRPGTAELGAGAGAAAVTSV
LGMYAAAGPYAGAPNYSAFLPYAADLSLFSQMGSQYELKDNPGVHPATFAAHTTPAYYPY
GQFQYGDPGRPKNATRESTSTLKAWLNEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFAN
ARRRLKKENKVTWGARSKDQEDGALFGSDTEGDPEKAEDDEEIDLESIDIDQIDERDGDQ
SNEDEEDKAEAPRARVAPPASARDQGSPLSAAETLKSQDSPLGLAKEVSEPGSTRLLSPG
AAAVGLQGAPHSKPKIWSLAETATSPDGAPKASPPPPSSHASAHGPPSGSPLQHPAFLPS
HGLYTCHIGKFSNWTNGAFLAQGSLLNMRSFLGVSAPHATPHGSHLTAPPPPQPPVQVAT
GILHGEKASARSSPALPERDLVTRPDSPPQQLKSPFQPVRDNSLAPQEGTPRILAALSSA
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtccttcccgcagctgggctaccctcaatacctaagcgccgcgggcccgggcgcctac
ggtggagaacgccctggggtgctggctgcggccgcggctgctgcggccgccgcctcgtcg
ggccggccagggactgcggagctaggagcaggcgcgggagccgccgcggtcacctcggtg
ctgggcatgtatgcagcggctggaccgtacgccggcgcacccaactacagcgccttcctg
ccctatgccgccgacctcagcctcttctcgcagatgggctctcagtatgaactcaaggac
aaccccggagtgcacccagctaccttcgcagcccacacaacgcctgcttattatccctat
ggccagttccaatacggggatcccggacggcccaagaacgccacgcgcgagagcaccagc
acgctgaaagcctggctcaacgaacaccgcaagaacccgtaccccaccaaaggagagaag
atcatgctggccatcatcaccaagatgaccctcacacaggtctccacctggttcgctaac
gcgcgccggcgcctcaagaaggagaacaaggtgacttggggggcgcgcagcaaggaccag
gaagacggtgccctctttggcagcgacacggagggcgaccccgagaaggccgaggacgac
gaggagatcgacctggaaagcattgacatcgatcagatcgacgagcgtgatggcgaccag
agcaacgaagacgaagaggacaaggcggaggctcctagggcacgcgtagcccctccagcc
tcagctcgggaccaaggctccccgttgtcggccgccgagacactcaagtcccaagattcg
cccttgggtctggctaaggaggtctcagagcccggcagcacgcgcctgctgagtcctggc
gccgcagcggtcggcctgcagggcgcgccgcacagtaagcccaagatctggtccctggct
gagacagccactagccccgacggtgcgcctaaggcgtctccaccgccaccctccagccac
gccagcgcacacgggccgcccagcggctcgcccctgcaacacccagcctttctacccagc
cacggactgtacacctgccacataggcaagttttccaactggaccaacggcgcgttccta
gcacagggctcgctgctgaacatgcgatctttcctgggcgtcagcgcgccgcatgcaaca
cctcacggctcacacctgaccgcaccgccacctccgcagccgcctgtccaggttgccacc
gggatactccatggtgagaaggcctcggcgcgtagcagtcctgcacttccagagagagac
ctagtcaccaggccggattcgcccccgcagcagctaaagtcgcccttccagccggtgcgc
gacaactcgctggccccgcaggagggaacgcctcggatcctcgcagccctctcgtctgcc
tga
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