Arvicanthis niloticus (African grass rat): 117723779
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Entry
117723779 CDS
T08817
Symbol
Itga1
Name
(RefSeq) integrin alpha-1
KO
K06480
integrin alpha 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04640
Hematopoietic cell lineage
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117723779 (Itga1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117723779 (Itga1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
117723779 (Itga1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117723779 (Itga1)
04810 Regulation of actin cytoskeleton
117723779 (Itga1)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117723779 (Itga1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
117723779 (Itga1)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117723779 (Itga1)
05412 Arrhythmogenic right ventricular cardiomyopathy
117723779 (Itga1)
05414 Dilated cardiomyopathy
117723779 (Itga1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117723779 (Itga1)
04515 Cell adhesion molecules [BR:
anu04515
]
117723779 (Itga1)
04090 CD molecules [BR:
anu04090
]
117723779 (Itga1)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117723779 (Itga1)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117723779 (Itga1)
CD molecules [BR:
anu04090
]
Proteins
117723779 (Itga1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
VWA_2
Integrin_A_Ig_3
FG-GAP_3
vWA_SIBA-E
LYRIC
FG-GAP_2
Integrin_alpha
EIF3I
Motif
Other DBs
NCBI-GeneID:
117723779
NCBI-ProteinID:
XP_034379230
LinkDB
All DBs
Position
19:39092487..39230952
Genome browser
AA seq
1179 aa
AA seq
DB search
MVLRRPASLEVTVACIWLLTVILGFSISFNVDVKNSMSFSGPVEDMFGYTVQQYENEDGK
WVLIGSPLVGQPKARTGDVYKCPVGRERSMPCVKLDLPVNTSIPNVTEIKENMTFGSTLV
TNPNGGFLACGPLYAYRCGHLHYTTGICSDVSPTFQVVNSFAPVRECSTQLDIVIVLDGS
NSIYPWESVTAFLNDLLKRMDIGPKQTQVGIVQYGQNVTHEFNLNTYSSTDEVLVAANKI
GRQGGLQTMTALGIDTARKEAFTEARGARRGVKKVMVIVTDGESHDNHRLKQVIQDCEDE
NIQRFSIAILGHYNRGKKSSEKFVEEIKSIASEPTEKHFFNVSDELALVTIVKALGERIF
ALEATADQSAASFEMEMSQTGFSAHYSQDWIMLGAVGAFDWNGTVVMQKANQTVIPHNTT
FQTEPTKMNEPLASYLGYTVNSATIPGDVLYIAGQPRYNHTGQVVIYKMEGRNVNILQTL
SGEQIGSYFGSVLTTIDIDKDSYTDLLLVGAPMYMGTEKEEQGKVYVYTVNQTRFEYQMS
LEPIKQTCCSSLKDNSCTKENKNEPCGARFGTAIAAVKDLNVDGFNDVVIGAPLEADHAG
AVYIYHGSGKTIRKEYAQRIASGGDGKTLKFFGQSIHGEMDLNGDGLTDVTIGGLGGAAL
FWARDVAVVKVTMNFEPNKVNIQKKNCRVEGKETVCINATICFHVKLKSKEDSIYEADLQ
YRVTLDSLRQISRSFFSGTQERKIQRNITVRESKCIQHSFYMLDKHDFQDSVRVTLDFNL
TDPESGPVLDDALPNSVHEHIPFAKDCGNKERCISDLTLGVSITEMSLLIVRSQNDKFNV
SLTVRNKGDSAYNTRTVVQYSPNLIFSGIEGIQKDSCESNQNITCRVGYPFLRTGEMVNF
KIIFQFNTSHLSENAVIHLSATSDSEEPVESLYDNEVNISIPVKYEVGLQFYSSASEHHI
SVAANETIPELINSTEDIGNEINVFYTIRKRGHFPMPELLLSISFPNLTSDGYPVLYPTG
WSSSETVNCRPRSLEDPLGINSGKKMTISKSEVLKRGTIQDCSTCKIATITCNLLPSDVS
QVNVSLILWKPTFIKAHFSSLNLTIRGELQSENSSLTLSSSNRKRELAIQISKDGLPGRV
PLWVILLSAFAGLLLLMLLILALWKIGFFKRPLKKKMEK
NT seq
3540 nt
NT seq
+upstream
nt +downstream
nt
atggtcctcaggcgccctgcaagcctagaggtcactgtagcctgcatctggcttctcacg
gttatcctaggcttctccatctccttcaatgttgatgtgaaaaactcaatgagtttcagt
ggcccagtggaggacatgtttggatacactgttcaacaatatgaaaacgaagacggcaaa
tgggttctcattggttctcctttagttggccaacccaaagcaagaactggagatgtttat
aagtgtccagttgggagagaaagatcaatgccttgtgtgaagttggatttaccagttaac
acatcgattcccaatgtcacagaaataaaggaaaacatgacctttggatcaactttagtc
accaacccgaatggaggatttctggcatgtgggccgttgtatgcctatagatgtggacat
ttgcattatacaactggtatatgttctgatgtcagccctacatttcaagttgtcaactca
ttcgcccccgtacgagaatgtagcacacagctggacatagtcattgtcctggatggctcc
aacagcatctacccctgggaaagcgtcaccgcctttctaaatgaccttcttaagaggatg
gatattggccctaaacagacacaggttggaatcgtacagtatggacagaatgtaacccat
gagttcaacctcaatacgtattcatcgacagacgaggtccttgttgcagcaaacaaaata
ggccgacagggtggcctccaaacgatgacagcccttggaatagacacagccaggaaagag
gcattcactgaagcccggggtgccaggaggggagtgaagaaagtcatggttattgtgacc
gatggagaatcgcatgacaaccatcgcctgaaacaggtcatccaagactgcgaggatgaa
aacattcagcgattttccatagctatccttggccactataacagggggaagaaaagcagt
gaaaaatttgtggaggagataaagtcgatcgcaagtgagcccacagaaaagcacttcttc
aatgtctcagatgagttggccctggtcactattgttaaagctctgggagaaaggatattt
gctttggaagctacggctgaccagtcagcagcttcatttgaaatggaaatgtctcagacc
ggcttcagtgctcattattcacaggactggatcatgcttggagcagtgggagcctttgac
tggaacggaactgtggtcatgcagaaggctaaccagactgtcatccctcataacaccacc
tttcaaactgagcccaccaagatgaatgagcctcttgcttcttacttaggttacacggtg
aactccgccaccatccctggagatgtgctgtatatcgctgggcagcctcggtataatcat
acaggccaggtcgtcatctacaagatggagggtaggaacgtcaacattctgcagacactc
agtggagagcagattggttcctactttggtagcgtcttaaccacaattgacattgacaaa
gattcttacactgacctgcttctcgtcggggcccccatgtacatggggacagagaaagag
gaacagggcaaggtgtacgtgtacactgtgaatcagacgaggtttgaatatcaaatgagc
ctggaaccaattaagcagacctgctgttcatccctgaaggataattcatgcacaaaagaa
aacaagaatgagccctgtggggcccgttttggaacagcaattgctgctgtaaaagacctc
aacgtggatggatttaatgacgttgtgattggagctccactggaagctgaccacgcaggg
gctgtctacatttatcatggcagtggcaagaccatacggaaagaatatgcacaacgcatt
gcgtcaggtggagatggcaagacgctgaaatttttcggccagtctatccacggagagatg
gatttaaatggcgatggtctgactgacgtgaccatcggaggccttggtggagctgccctc
ttctgggccagagatgtggctgtagttaaagtgaccatgaattttgaacccaataaagtg
aatattcaaaagaaaaactgccgtgtggagggcaaagaaacagtatgcataaatgctaca
atatgttttcacgtgaagttgaagtctaaagaagactcgatttacgaggctgatctgcag
tatcgtgtcacccttgattcactgaggcagatatcacggagctttttttctggaactcag
gaaaggaagattcaaagaaacatcaccgtccgagaatccaaatgcatccagcactccttc
tacatgttggataagcatgactttcaggactccgtgagagtgactttggattttaatctc
actgatccagaaagtgggcctgtgcttgatgacgctctgccaaattcagtccatgaacac
attccttttgccaaagactgtggaaacaaggaaagatgcatttcagacctcaccctgggt
gtgtccatcacagaaatgagcctgctgattgtcaggtcccagaatgacaagttcaatgtc
agcctcacagtcagaaacaaaggcgacagtgcatataataccaggacagtggtgcagtat
tctccaaatctgattttttcaggaattgaggggatccaaaaagatagctgtgaatctaat
caaaatatcacttgtagagttggatatcctttcctgaggacaggagaaatggttaacttc
aagataatattccagtttaatacatcccatctctcagaaaatgcagtcatccatttaagt
gcaacaagcgacagtgaggagccagtggaatctctttatgataatgaagtaaatatttcc
atcccagtaaaatatgaagtcgggctgcagttttacagttctgcgagtgagcaccacatc
tcagttgctgccaatgagacgatccccgagcttattaactccactgaggacattgggaat
gaaattaatgtcttctatacgattagaaaaagggggcatttcccaatgccagaacttctg
ctgtcaatttcattccccaatttgacgtcagatggttatcctgtactgtatccaactgga
tggtcctcttctgaaactgtgaactgcagaccccgaagccttgaggatcctttgggtatc
aactctgggaagaaaatgacaatatcaaaatctgaggttctcaaaagaggcacaatccag
gactgcagtacctgtaaaattgcaaccatcacgtgtaatctccttccttctgacgtgagt
caagtgaatgtctcactcatcttgtggaaaccaactttcataaaagcacatttttccagt
ttaaatcttactatacggggagaacttcagagtgaaaactcatcgctgactttaagcagc
agcaaccggaaacgggagctggctattcagatatccaaagacgggctcccaggcagagtg
ccgctgtgggtaatcctcctgagcgcctttgcgggactgctgctgttaatgctgcttata
ttagctctgtggaagattggattcttcaaaaggccactaaagaagaaaatggagaaatga
DBGET
integrated database retrieval system
