Arvicanthis niloticus (African grass rat): 117723867
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Entry
117723867 CDS
T08817
Symbol
Trip13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117723867 (Trip13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117723867 (Trip13)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
117723867 (Trip13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
AAA
TRIP13_N
AAA_22
nSTAND3
AAA_16
AAA_18
AAA_14
Viral_helicase1
AAA_25
AAA_33
AAA_5
AAA_28
NPHP3_N
RuvB_N
TsaE
ATPase_2
IstB_IS21
Cytidylate_kin
RNA_helicase
DUF815
TIP49
NACHT
AAA_17
ABC_tran
AAA_11
AAA_24
AAA_RNF213_4
AAA_30
AAA_7
ATPase
bpMoxR
Mg_chelatase
PduV-EutP
AAA_19
nSTAND1
PhoH
Rad17
NB-ARC
SLFN-g3_helicase
nSTAND6
AAA_3
Motif
Other DBs
NCBI-GeneID:
117723867
NCBI-ProteinID:
XP_034379322
LinkDB
All DBs
Position
19:1079011..1102267
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AA seq
432 aa
AA seq
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MDEAVGDLKQALPCVAESPAVHVEVLQRSGSTAKKEDIKMSVYKLLNRHNIVFGDYVWTE
FDEPFLTRNVQSVSIVDTELKAKDPQPIDLSACAIALHIFQLNEEGPSSENLDEETENII
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVMTTLLFSDKNVDSNLITWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLI
DDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVNAVLTQIDQIKRHSNVVILTTSN
ITEKIDVAFVDRADIKQYIGPPSAAAIFRIYQSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALYIQAPSVTIEGFLQALSLAVDK
QFEEKKKLSAYN
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggcagtgggcgacctgaagcaagcgcttccctgtgttgcggagtcgcccgcg
gtccatgtggaggttctgcagcgcagcggaagcactgcaaaaaaagaagatataaagatg
agtgtttacaaactgctcaacaggcataatattgtatttggagattacgtatggactgag
tttgatgagccttttctaaccagaaatgttcagtcggtgtctattgttgacacagaatta
aaggctaaagaccctcagcccattgatctgagtgcatgcgccattgcacttcacatcttc
cagctgaatgaagaaggccccagcagtgaaaatttggatgaagaaacagaaaatataatt
gcagcgagtcactgggttctgcctgcagctgaatttcatgggctttgggatagcctcgtg
tatgatgtggaggtcaaatcgcatcttcttgattatgtgatgaccaccttactgttctca
gacaagaatgtggacagcaaccttatcacctggaaccgggtggtactgctgcatggtcct
ccgggtactggaaaaacatccctttgtaaagcattagcccagaaactgaccatcagactg
tcaagcaggtaccgatatggccagttgattgaaataaacagccacagcctattttctaag
tggttttcagaaagtggcaagttggtaactaaaatgttccagaagattcaggacttgatt
gatgataaagaagctctggtgtttgttctgattgatgaggtggagagtcttacagctgct
cgaaatgcttgccgtgcaggtgcagagccatcagatgctatccgtgtagtcaatgctgtg
ttgactcagattgatcagattaaaaggcattccaatgtggtgattctgaccacttccaac
atcaccgagaagattgatgtggcttttgtggatagagctgacatcaagcaatatattggc
ccaccctctgcagcagccatcttccgaatctaccagtcttgtttagaagaattgatgaag
tgccagatcatatatcctcgtcagcagctgttgacccttcgagagctagaaatgattggc
ttcattgaaaataatgtatcaaagctgagcctccttttgagtgaaatttcaaggaagagt
gagggcctcagtggccgggtcttgaggaaactccctttcctggctcatgcactctacatc
caggctcccagcgtcaccatcgagggattcctccaggccctgtctctggcagtggacaaa
cagtttgaggagaaaaagaaactttcagcttataattga
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