Arvicanthis niloticus (African grass rat): 117723869
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Entry
117723869 CDS
T08817
Symbol
Nipbl
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117723869 (Nipbl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117723869 (Nipbl)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117723869 (Nipbl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
Cnd1
Cnd3
DNA_repr_REX1B
Motif
Other DBs
NCBI-GeneID:
117723869
NCBI-ProteinID:
XP_034379327
LinkDB
All DBs
Position
19:28988612..29154847
Genome browser
AA seq
2798 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTTKSLLFNSRIAEEVNCLLACRDDN
LVSQLVHSLNQVSTDHIELKDNLGSDDPEGDIPVLLQAVLARSPNVFREKSMQNRYVQSG
MMMSQYKLSQNSMHSSPASSNYQQTTISHSPSSRFVPPQTSSGNRFMPQQNSPVPSPYAP
QSPAGYMPYSHPSSYTTHPQIQQASVSSPIVAGGLRNIHDNKVSGPLSGNSANHHADNPR
HGSSDDYLHMVHRLSSDDGDSSTMRNAASFPLRSPQPVCSPAGSDGTPKGSRPPLILQSQ
SLPCSSPRDVPPDILLDSPERKQKKQKKMKLGKDEKDQNEKAAMYDIISSPTKDSTKLTL
RLSRVRSSDMDQQEDMLSGMENSNVSENDIPFNVQYPGQTSKTPITPQDVNRPLNAAQCL
SQQEHTAFLPANQVPVLQQNTSVATKQPQTSVVQNQQQVSQQGPIYDEVELDALAEIERI
ERESAIERERFSKEVQDKDKPLKKRKQDSYPQEAGGATGGNRPASQETGSTGNGSRPALM
VSIDLHQAGRVDSQASITQDSDSIKKPEETKQCNDAPISVLQEDIVGSLKSIPENHPETP
KKKSDPELSKSEMKQNESRLSESKPNENQLGESKSNESKLETKTETQTEELKQTENKTTE
SKQSESAVVEPKQNENRPCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEG
RPETPKQKGDGRPETPKQKSEGRPETPKQKGEGRPETPKHRHENRRDSGKPSTEKKPDVS
KHKQDIKSDSPRLKSERAEALKQRPDGRSESLRRDHDSKQKSDDRGESERHRGDQSRVRR
PETLRSSSRNEHSTKSDGSKTEKLERKHRHESGDSRDRSSGEQKSRPDSPRVKQGDTNKS
RPGFKSPNSKDDKRTEGNRSKVDSNKAHTDNKAEFPSYLLGGRSGALKNFVIPKIKRDKD
GNITQETKKMDMKGEQKDKVEKMGLVEDLNKGAKPVVVLQKLSLDDVQKLIKDREEKSRS
SLKSIKNKPSKSNKGSIDQSVLKELPPELLAEIESTMPLCERVKMNKRKRSTVNEKPKYA
EISSDEDNDSDEAFESSRKRHKKDDDKAWEYEERDRRSSGDHRRSGHSHDGRRSSGGGRH
RNRSPSDSDMEDYSPPPSLSEVARKMKKKEKQKKRKAYEPKLTPEEMMDSSTFKRFTASI
ENILDNLEDMDFTAFGDDDEIPQELLLGKHQLNELGSESAKIKAMGIMDKLSTDKTVKVL
NILEKNIQDGSKLSTLLNHNNDTEEEERLWRDLIMERVTKSADACLTTINIMTSPNMPKA
VYIEDVIERVIQYTKFHLQNTLYPQYDPVYRLDPHGGGLLSSKAKRAKCCTHKQRVIVML
YNKVCDIVSSLSELLEIQLLTDTTILQVSSMGITPFFVENVSELQLCAIKLVTAVFSRYE
KHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDVDGEPMYIQMVTALVLQLIQCVVHLPS
SEKDPNSEEDSNKKVDQDVVITNSYETAMRTAQNFLSIFLKKCGSKQGEEDYRPLFENFV
QDLLSTVNKPEWPAAELLLSLLGRLLVHQFSNKSTEMALRVASLDYLGTVAARLRKDAVT
SKMDQGSIERILKQVSGGEDEIQQLQKALLDYLDENTETDPSLVFSRKFYIAQWFRDTTL
ETEKAMKSQKDEESSDGTHHSKEIETTGQIMQRAENRKKFLRSIIKTTPSQFSTLKMNSD
TVDYDDACLIVRYLASMRPFAQSFDIYLTQILRVLGENAIAVRTKAMKCLSEVVAVDPSI
LARLDMQRGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRK
RVIKILRDICIEQPTFPKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTPHNDKEAM
TRKILNITDVVAACRDTGYDWFEQLLQNLLKSEEDSSYKPVKKACTQLVDNLVEHILKYE
ESLADSDNKGVNSGRLVACITTLFLFSKIRPQLMVKHAMTMQPYLTTKCSTQNDFMVICN
VAKILELVVPLMEHPSETFLATIEEDLMKLIIKYGMTVVQHCVSCLGAVVNKVTQNFKFV
WACFNRYYGAISKLKSQHQEDPNNTSLLTNKPALLRSLFTVGALCRHFDFDLEDFKGNSK
VNIKDKVLELLMYFTKHSDEEVQTKAIIGLGFAFIQHPSLMFEQEVKNLYNSILSDKNSS
VNLKIQVLKNLQTYLQEEDTRMQQADRDWKKVAKQEDLKEMGDVSSGMSSSIMQLYLKQV
LEAFFHTQSSVRHFALNVIALTLNQGLIHPVQCVPYLIAMGTDPEPAMRNKADQQLVEID
KKYAGFIHMKAVAGMKMSYQVQQAINTCLKDPVRGFRQDESSSALCSHLYSMIRGNRQHR
RAFLISLLNLFDDTAKTEVTMLLYIADNLACFPYQTQEEPLFIMHHIDITLSVSGSNLLQ
SFKESMVKDKRKERKVSPAKENESSESEEEVPRPRKARKRVDSESDSDSEDDVNSVMKCL
PENSAPLIEFANVSQGILLLLMLKQHLKNLCGFSDSKIQKYSPSESAKVYDKAINRKTGV
HFHPKQTLDFLRSDMANSKLTEDVKRSIVRQYLDFKLLMEHLDPDEEEEEGEVSASTNAR
NKAITSLLGGGSPKNNTAADTEDEESDGEDRGGGTSGSLRRSKRNSDSTELAAQMNESVD
VMDVIAICCPKYKDRPQIARVVQRTSSGVSVQWMAGSYSGSWTEAKRRDGRKLVPWVDTI
KESDIIYKKIALTSANKLTNKVVQTLRSLYAAKDGTSS
NT seq
8397 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggatatgccccatgtccccataactactcttgcggggattgctagtcttacg
gacctcctgaaccagctgcctcttccatctcctttacctgctacaactacaaagagcctc
ctctttaattcacgaatagcagaagaggtgaactgccttttggcctgtagggatgacaat
ttggtttcacagcttgtccatagtctcaaccaggtatcaacagatcacatagaactgaaa
gataaccttggcagtgatgatcctgaaggcgatataccagtcttgttgcaggccgtcctg
gcaaggagtcctaatgttttcagggagaaaagcatgcagaacagatatgtacagagtgga
atgatgatgtctcagtataaactttctcagaattccatgcacagtagtcctgcatcttcc
aattaccaacaaaccactatctcacatagcccctccagccggtttgtgccaccacagaca
agctctgggaacagatttatgccacaacaaaatagcccagtgcctagtccatatgcccca
cagagtcctgcaggatacatgccatattcccatccgtcaagttacacaacacatccacag
atacagcaagcatcagtatcaagtcctattgttgctggtggcttgagaaacatccatgat
aacaaagtttctggtccattatctggcaactcagctaatcatcatgctgataaccctagg
cacggctcaagtgacgactacctacacatggtgcacaggctaagtagtgatgatggcgat
tcttcaacaatgaggaacgctgcatcttttcccttaaggtctccgcagccagtgtgttct
cctgctggaagtgacggaactcctaaaggatcaagaccacctttaattctacagtctcag
tctttaccttgttcatcacctcgagatgttcctccagatatcttgctagattctccagaa
agaaaacaaaaaaagcaaaagaaaatgaaattaggcaaagatgaaaaagaccagaacgag
aaagctgcaatgtatgatataattagctctccaaccaaggactccactaaacttacgtta
agactttctcgtgtaagatcttcagatatggaccagcaagaggatatgctatctggtatg
gaaaatagcaatgtttcagaaaatgatattccttttaatgtgcagtatccaggacagact
tcaaaaacacccattactccacaggatgtaaaccgcccacttaatgctgctcagtgtttg
tcgcagcaagaacacacagcattccttccagcaaatcaagtgcctgttttacaacagaac
acttcagttgctacaaaacaaccacagacttctgtagtacaaaatcagcaacaagtatca
caacaggggccgatatatgacgaagtcgaattggacgcattagcagaaattgaacggata
gagagagaatcagccattgaaagggagcgcttctcaaaggaagttcaagataaggataag
cctttgaaaaaaagaaaacaagattcttacccacaggaggctgggggtgctacaggaggt
aatagaccagcttctcaggagacgggttctacgggaaatgggtcaaggccagcattaatg
gttagcattgatcttcatcaggcaggaagagtggactctcaggcttctataactcaggat
tcagactccataaaaaagcctgaagaaaccaaacagtgtaatgatgcacccatttctgtt
cttcaggaagatattgttggaagtcttaagtctataccagaaaaccatcctgagactcct
aaaaaaaagtctgatcctgagctttcaaaaagcgaaatgaaacaaaatgaaagtaggttg
tcagaatctaaaccaaatgaaaatcagctgggggagtcaaaatcaaatgaaagtaagtta
gaaactaaaactgagacccaaacagaagaacttaagcaaactgagaacaaaacgacagag
tccaaacagagtgagagtgctgtagttgagcctaaacagaatgaaaatagaccgtgtgac
acaaaaccaaatgacaacaaacaaaacaacaccaggtcagaaaacacaaaagcaagacct
gaaaccccaaagcagaaagctgaaagccggcctgaaaccccaaagcaaaagagtgaaggg
cggcctgaaaccccaaaacagaagggtgatggacgacctgagactccaaagcaaaagagt
gaaggccggcctgaaactccaaagcaaaaaggtgaaggccggcctgaaaccccaaaacat
aggcatgaaaataggagagattctggaaagccatcaacagagaagaaacccgatgtgtct
aagcataaacaggatatcaaatctgactcacctcgcttaaaatcagaaagagctgaagcc
ttaaagcagagacctgatgggcgatcggagtcactaagacgtgaccatgatagtaaacaa
aaatcagatgacaggggtgagtcagaacgacatcggggtgatcaatcaagggttcgaaga
ccagaaacattgagatcttctagtagaaatgaacatagcactaaatcagatggttcaaaa
actgaaaagctagaaagaaaacataggcatgaatcaggggactcacgggacagatcttct
ggggaacaaaaatcaagaccagacagtcctcgtgtaaaacaaggagatactaataaatca
agacctggttttaagtcaccaaatagtaaagatgacaaaaggacagagggtaacagaagt
aaagtagacagtaataaagcgcacactgataataaggccgaattcccaagctatttgttg
ggggggaggtctggtgcattgaaaaatttcgtcattccaaaaatcaagagggataaagat
ggcaacataactcaggaaactaagaaaatggacatgaaaggagagcagaaagacaaagta
gaaaaaatgggattagttgaagatctaaacaaaggagctaagcctgtagttgttctgcaa
aaactatcgctggatgatgtccagaagctaattaaagatagagaggagaagtcaagaagt
tcccttaagtctatcaagaataagccatcaaagtcaaataaaggtagtatagatcaatca
gtgttaaaagaattgccccctgaactcctggcagaaattgaatctaccatgccactttgt
gaacgtgtgaaaatgaacaaacgcaagcgtagcacagttaatgaaaagccaaaatatgct
gaaatcagttcagatgaagataatgatagtgatgaagcttttgaatcctctagaaaacgg
cataagaaagatgacgataaagcttgggaatacgaagagcgagacagaagaagctctggg
gatcataggaggagtggccactcacacgacggaaggaggagttccggtggtggtcgtcac
cgaaaccgaagtccatcagattctgatatggaagattactctcctcctcccagccttagt
gaggttgctagaaaaatgaagaaaaaagaaaaacaaaagaaaaggaaagcttatgagcca
aaactaacaccggaagaaatgatggattcttcaacttttaagagatttacagcctcaata
gagaatattttggataatttagaagatatggattttactgcatttggtgatgatgatgaa
attcctcaggaactgcttttaggaaaacatcagcttaatgaacttgggagtgaatctgct
aaaattaaagccatgggtataatggacaagctttcaactgacaaaactgtgaaagtccta
aatatattggagaagaatattcaagacggatccaagctttccacattgttaaatcataat
aatgatactgaagaagaagaaagattgtggagagacctaattatggaaagagttacaaag
tcagcagatgcctgtcttacgactatcaacattatgacatctcctaacatgccaaaagct
gtatacattgaagatgtaattgaaagagttatacagtatactaaatttcacttacagaac
acactctatccccagtatgaccctgtttacagattagatccacatggaggagggttatta
agctcaaaggccaaacgggctaaatgttgtactcataagcagagagtgatagtgatgctt
tataacaaagtttgtgacattgttagcagtttatcagaattgctagagatacagcttcta
acagacacaacaattcttcaggtctcatcaatgggaataacaccattttttgtggaaaat
gttagtgaactacaattgtgtgccattaagttagtcactgcagtattttcaagatatgaa
aagcataggcagttaatattggaagaaatttttacttcacttgcaagattaccaactagc
aagagaagtttaagaaacttcaggttaaatagtagtgatgtggatggagagcctatgtat
attcagatggttacagcactagttttacagcttattcagtgcgtagttcacttaccgtca
tcagagaaggatcctaattcagaagaagactcaaacaaaaaagttgatcaggatgttgtc
attactaactcttatgaaacagctatgagaacagcccaaaactttctttccatcttcctt
aaaaaatgtggtagtaaacaaggtgaagaagattacagaccactttttgaaaattttgtt
caagaccttctttcaacagtcaataagcccgagtggccagctgccgaactactccttagt
ttgttagggagactgttggttcatcagttcagtaataagtcaacagagatggctttaaga
gtggcatctcttgattaccttgggactgtcgccgcgcggctgagaaaagatgctgtcacc
agcaagatggatcaagggtctatagaacgaattttaaaacaggtttccggaggagaagat
gaaatccaacaattgcaaaaggcattgcttgattatttggatgagaacactgagactgac
ccttcactagtgttttctcgtaaattctatatagcccagtggttccgagacacaactctg
gaaacagaaaaggcaatgaaatcacaaaaagatgaagaatcatcagatgggacacatcat
tcaaaagaaattgagacaactggtcaaataatgcagcgagctgagaaccggaagaagttt
cttagaagcattatcaaaaccacaccttctcagttcagcacattaaaaatgaactctgat
actgtggactacgatgatgcgtgcttgattgttcgatatttggcctctatgaggccgttt
gcccagagctttgatatttatttgacacagatactacgagttcttggtgaaaatgcaatt
gctgttcgaacaaaagccatgaagtgtttgtcagaggttgtcgctgtagaccccagtata
ctagcaaggcttgacatgcagcgtggagtccatggacgattaatggacaactccactagt
gttcgagaggcagcagtggagttgctcggtcggtttgtcctttgccgaccccagcttgcc
gagcagtattatgacatgctgattgagagaatactggatactggtatcagtgtcaggaaa
agagtaataaagattttaagagacatctgtattgaacaaccaacatttccaaaaattaca
gagatgtgtgtaaaaatgatccgcagagtcaacgatgaagagggcattaagaaattagta
aatgaaacattccaaaagctctggtttactccaactccacacaatgacaaagaagcaatg
acaaggaaaattttaaacatcactgatgtggtcgcagcatgcagagatactggatatgac
tggtttgagcaactccttcaaaatttgttgaagtctgaagaggattcctcatataaacct
gtgaagaaagcttgtactcaacttgttgataacctagttgagcatattcttaaatatgag
gaatctctagctgactcagacaataaaggtgtaaattctggaagattggtagcttgtata
accactttgttcttattcagcaaaataagaccccaactcatggtgaaacatgccatgact
atgcagccgtaccttaccactaaatgtagtacgcaaaatgacttcatggttatctgtaat
gtggcaaaaatccttgagttagttgtaccactgatggaacacccaagtgaaactttcctt
gccactattgaagaggatctgatgaagctgatcatcaaatacggcatgactgtagtacag
cattgtgtgagctgtcttggggctgttgtaaataaagtgacccagaattttaagtttgtg
tgggcctgtttcaacagatactacggtgccatttcaaaattaaaaagtcagcaccaagaa
gacccaaataacacttcacttttaacaaataaaccagcgcttcttaggtccctcttcact
gttggagcactttgtcggcattttgattttgatctggaagattttaaaggcaacagtaag
gttaacataaaggataaagtacttgagctgttgatgtattttacaaaacactcagatgaa
gaagtacaaacaaaagccatcattggtctaggatttgcctttatacagcatccgagtcta
atgtttgagcaagaagtgaagaatctgtataatagtattttatctgataagaactcctca
gtgaatttaaaaatacaagtgttaaaaaacctccagacttacctacaagaagaagatacg
cggatgcagcaggcagacagagactggaagaaagtcgcaaaacaggaagacttgaaggaa
atgggagacgtctcctcagggatgagcagttccatcatgcagctttacctcaagcaggtg
ctggaggccttctttcacacccagtcgagtgtgcgccactttgccctgaatgtcatcgct
ctgactctaaaccaaggtctcatccatccggtccagtgtgttccatacttaattgccatg
ggcacagatccagaacctgctatgcggaacaaggctgatcagcagcttgtggaaatagac
aagaaatacgctggattcatccatatgaaagccgtggctggtatgaagatgtcttaccag
gtccaacaggcgatcaacacgtgcctaaaagaccctgtaaggggtttccgacaggatgag
tcctccagtgctttgtgctcacacctgtactccatgatccgtgggaaccgccaacacaga
cgcgcctttcttatttctttactcaacctctttgatgacacagcaaaaacagaagtgact
atgctcttgtacatagcagacaatctagcctgttttccataccagactcaggaagagccg
ctgtttataatgcaccacatagacattacgctctctgtttccggtagtaacctattgcag
tcattcaaggagtctatggtgaaagacaaaaggaaagagagaaaagtgtcccctgctaag
gagaatgagtcaagtgagagtgaggaggaagtgcccagacctcggaaggctcggaagcgg
gtcgattccgagtcagactcagactcagaagatgatgtaaattcagtgatgaagtgtttg
ccagaaaattcagcccctttgattgaatttgcaaatgtttcccagggtattttattactt
cttatgttaaagcagcacctgaagaatctctgtggattttctgatagtaaaattcaaaaa
tattctccatctgaatctgcaaaagtgtatgataaagccattaatcggaaaacgggggtt
cattttcatcccaaacaaacactggacttcctgcgaagtgacatggctaattccaaactg
acggaggacgtgaagaggagcatagtaaggcagtacctagactttaaacttctcatggaa
catctagaccctgatgaagaagaagaggaaggagaggtgtcagctagcacaaatgctcgg
aacaaagcgattacctcgctgcttggagggggcagtcctaaaaataacacagcagcagac
acagaagatgaggagagtgatggggaggatagaggaggaggcacttcagggtcattgaga
aggtcaaaacgaaattcagactctacggagttggcagcacagatgaatgaaagtgttgac
gtcatggatgtcatcgctatttgctgtccaaagtacaaagaccgaccacagattgcaaga
gtagtgcagaggaccagcagtggcgtcagtgtccagtggatggcaggctcctacagcggc
tcctggacggaggccaagcgccgcgatggccgcaaactggtgccttgggtagacactatt
aaagagtcagacattatttacaaaaaaattgctctaacgagtgctaataagctgactaat
aaagttgtccagactttacgatccctgtatgccgccaaggatgggacttccagctaa
DBGET
integrated database retrieval system
