Arvicanthis niloticus (African grass rat): 117723874
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Entry
117723874 CDS
T08817
Symbol
Ddx4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
117723874 (Ddx4)
Enzymes [BR:
anu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
117723874 (Ddx4)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
117723874 (Ddx4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
117723874
NCBI-ProteinID:
XP_034379334
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All DBs
Position
19:41487708..41540982
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AA seq
736 aa
AA seq
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MGDEDWEAEILKPHVSSYVPVFEKKTWLSFVQDKYSSGANGDTFNRTSASSAEMEDGHSG
RDHFMRSGFPSGRNLGNRDIGESSKRENASTTGSFGRGKGFGNRGFLNNKFEEGDSSGFW
KESNNDCEDNQTRSRGFSKRGGYQDGNDSEASGPFRRGGRGSFRGCRGGFGLGRPNSDYD
QDQGTQRGGGLFGSRKPAANDSGNGDTYQSRSGSGRGGYKGLNEEVVTGSGKNSWKSEAE
GGESSDIQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEE
ANLCQTLNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTGSGKTAAFLLPILAHMMR
DGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYGGTQFGHSIRQI
VQGCNILCATPGRLMDIIGKEKIGLKQVKYLVLDEADRMLDMGFGPEMKKLISCPGMPSK
EQRQTLLFSATFPEEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQTILQVGQYSKREKLV
EILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCP
VLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDTESDNHL
AQSLVKVLSDAQQDVPAWLEEIAFSTYVPPSFNSSTRGTVFASVDTRKNYQGKNTLNTAG
ISSSQAPNPVDDESWD
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgggagatgaagattgggaggcagaaatcctcaaacctcatgtgtcttcctacgttcct
gtatttgagaagaaaacttggctttctttcgtacaggataaatattcttctggagcgaat
ggagacacttttaacaggacttcagcttcatcagcagaaatggaagatggacattctgga
agagatcatttcatgagaagtggatttccttctggaagaaatttaggaaacagagatatt
ggcgagtctagtaagagagagaatgcatctacaactggtagctttggaagaggaaagggt
tttggaaacagaggttttttaaataacaagtttgaagaaggtgatagctctggtttctgg
aaagagtctaataatgactgtgaagataatcagactcggagcagagggttttctaagcga
ggcggctatcaagatggaaatgattcagaagcttcaggtccattcagaagaggtggaaga
ggtagtttccgaggttgccgtggaggatttggtttaggaagaccaaatagtgactatgac
caagatcaggggacacagcgtggtggtggcctttttggttctaggaaaccagcagcaaat
gattcaggcaatggtgacacttaccaaagcagaagtgggagtggccgaggtggttacaaa
ggtttaaatgaagaagtagtaacaggctctggaaagaattcttggaagtcagaagctgaa
ggaggcgaaagcagtgatattcaaggtccaaaagtgacatacataccccctcctccacca
gaggatgaggactccatctttgcacattatcagacaggcataaactttgataaatatgat
accatacttgttgaagtatctggacatgatgcaccaccagcaattttgacttttgaagaa
gctaatctatgtcagacgctaaataacaacattgctaaagctggctatactaagcttact
cctgtgcagaaatacagcattcccattgtattagcaggacgagatttgatggcttgtgct
cagacagggtctgggaaaactgcagcttttctcttgcctattttggctcatatgatgcgg
gatggaataaccgccagtcgctttaaagaacttcaggaaccagagtgcatcattgtagca
ccaactcgagaattgatcaaccaaatttatttggaagccagaaaattttcttttgggact
tgtgtaagagctgttgtcatatatggaggaacccagtttgggcattcaattcgacagata
gttcaagggtgtaatatattatgtgctactccagggaggctgatggatatcataggcaaa
gaaaagattggtctcaaacaagtcaagtacttagttttggatgaagctgatcgaatgttg
gatatgggttttggtccagagatgaagaagttaatttcttgtccaggaatgccatcaaag
gaacaacgccaaacccttttattcagtgcgacttttccagaagaaatccagaggttggct
ggggagtttctaaagtcaaattatttgtttgttgctgttggacaagtgggaggagcttgc
agagacgttcagcagacgattcttcaagttggccagtattcaaaaagagaaaaacttgtt
gagattctacgaaacataggtgatgaaagaactatggtctttgttgaaaccaagaaaaaa
gcagatttcattgcaacttttctttgtcaagaaaaaatatcaactacaagtattcatggt
gatcgggaacagagggagagagaacaagctcttggagattttcgctgtggaaagtgccca
gttcttgttgctacttcagtggctgccagagggcttgatattgaaaatgttcaacatgtt
atcaatttcgaccttccttctaccattgatgaatatgttcatcggatcgggcgtactggg
cgttgtggaaacactggcagggccatttctttttttgataccgaatctgataatcattta
gcacagtctctagttaaagtgctgtcagatgctcaacaggatgttcctgcatggttagaa
gaaattgccttcagtacgtatgtgccgcccagcttcaacagtagcacacgagggaccgtg
tttgcatctgttgacactaggaagaattaccagggcaagaacacgttgaatacagcaggg
atttcttcttcacaagctcccaatccagttgatgacgagtcatgggattaa
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