Arvicanthis niloticus (African grass rat): 117723944
Help
Entry
117723944 CDS
T08817
Symbol
Itga2
Name
(RefSeq) integrin alpha-2 isoform X1
KO
K06481
integrin alpha 2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03271
Virion - Rotavirus
anu04145
Phagocytosis
anu04151
PI3K-Akt signaling pathway
anu04510
Focal adhesion
anu04512
ECM-receptor interaction
anu04518
Integrin signaling
anu04611
Platelet activation
anu04640
Hematopoietic cell lineage
anu04810
Regulation of actin cytoskeleton
anu04820
Cytoskeleton in muscle cells
anu05165
Human papillomavirus infection
anu05200
Pathways in cancer
anu05205
Proteoglycans in cancer
anu05222
Small cell lung cancer
anu05410
Hypertrophic cardiomyopathy
anu05412
Arrhythmogenic right ventricular cardiomyopathy
anu05414
Dilated cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03271 Virion - Rotavirus
117723944 (Itga2)
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
117723944 (Itga2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117723944 (Itga2)
04518 Integrin signaling
117723944 (Itga2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
117723944 (Itga2)
09144 Cellular community - eukaryotes
04510 Focal adhesion
117723944 (Itga2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117723944 (Itga2)
04810 Regulation of actin cytoskeleton
117723944 (Itga2)
09150 Organismal Systems
09151 Immune system
04640 Hematopoietic cell lineage
117723944 (Itga2)
04611 Platelet activation
117723944 (Itga2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117723944 (Itga2)
05205 Proteoglycans in cancer
117723944 (Itga2)
09162 Cancer: specific types
05222 Small cell lung cancer
117723944 (Itga2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
117723944 (Itga2)
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
117723944 (Itga2)
05412 Arrhythmogenic right ventricular cardiomyopathy
117723944 (Itga2)
05414 Dilated cardiomyopathy
117723944 (Itga2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
anu04147
]
117723944 (Itga2)
04515 Cell adhesion molecules [BR:
anu04515
]
117723944 (Itga2)
04090 CD molecules [BR:
anu04090
]
117723944 (Itga2)
Exosome [BR:
anu04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
117723944 (Itga2)
Exosomal proteins of bladder cancer cells
117723944 (Itga2)
Cell adhesion molecules [BR:
anu04515
]
Integrins
Integrin alpha subunits
117723944 (Itga2)
CD molecules [BR:
anu04090
]
Proteins
117723944 (Itga2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
Integrin_A_Ig_2
FG-GAP
Integrin_A_Ig_3
VWA_2
FG-GAP_2
FG-GAP_3
Integrin_alpha
CLIPPER
ITGAX-like_Ig_3
HisK_sensor
DUF6479
Motif
Other DBs
NCBI-GeneID:
117723944
NCBI-ProteinID:
XP_034379433
LinkDB
All DBs
Position
19:39251380..39348205
Genome browser
AA seq
1178 aa
AA seq
DB search
MGPGQTGGALLLRLLMLSQGTLSCLAYNVGLPGLKVFSGPSSEQFGYSVQQLTNPQGNWL
LVGSPWSGFPENRMGDVYKCPVDLPTATCEKLNLQNSASISNVTEIKTNMSLGLTLTRNP
GTGGFLTCGPLWAHQCGNQYYATGICSDVSPDFQSLTSFSPAVQACPSLVDVVVVCDESN
SIYPWEAVKNFLVKFVQGLDIGPKKTQVALIQYANEPRTVFNLNTYNNKEDMVMATSKTL
QDGGDLTNTFKAIQYARDFAYLLESGGRPGATKVMVVVTDGESHDGSKLKTVIQQCNDDD
ILRFGIAVLGYLNRNDLDTKNLIKEIKAIASTPTERYFFNVADEAALLEKAGTLGDHIFS
IEGTVQGGDNFQMEMAQVGFSADYSPQNAILMLGAVGAFDWSGTVVQETSHEHLIFPKQA
FDQVLQDRNHSSFLGYSVAAISTENGIHFVAGAPRANYTGQIVLYSVNKHGNVTVIQSHR
GDQIGSYFGSVLCSVDVDKDTITDVLLVGAPMYMNDLKKEEGKVYLFTITKGILNQHQFL
EGPEGTGNARFGSAIAALSDVNMDGFNDVIVGSPVENENSGAVYIYNGHQGTIRTKYSQK
ILGSDRAFGNHLQFFGRSLDGYEDLNGDSITDVSIGALGQVVQLWSQSIADVALEASFTP
DKITLLNKEAKIILKLCFRAKFKPSGQNNQVAILFNMTLDADAYSSRVTSRGIFKENSER
FLQKKMVVNEVQKCSEYHISIQKPSDVVNPLDLRVDISLENPGTSPALEAYSETVQVFSI
PFYKECGSDGICISDLILDVQQLPALQNQPFIVSNQNKRLAFSVTLKNRGESAYNTAVLV
EFSENLFFASFSMPVDGTEVTCQVGSSQKSVTCDVGYPALKSEQQVTFTINFDFNLQNLQ
NQAAINFQAFSESQETNKADNSVSLTIPLLYDAELHLTRSTNINFYEISSDENAPSVINS
VEDIGPKFIFSLKVTAGSAPLSMALVTIHIPQYTKEKNPLLYLTGIQTDEAGDISCAAEV
NPLKLPHTASPVSFKDENFRHTKELDCRTTSCSNITCWLKDLHMKAEYFINVTTRVWNRT
FAASTFQTVQLTATAEIDTHNPQLFVIEENAVTIPLMIMKPTEKAEVPTGVIIGSVIAGI
LLLLAMVAALWKLGFFKRQYKKMGQNPDEMDETTELNS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgggaccgggacagacagggggcgcgctcctgctgcggctgctaatgctctctcaaggt
actttgagttgtctggcatacaatgttggcctcccaggactgaaagtattttctgggcct
tcaagtgaacagtttgggtattcagtgcagcagcttacaaacccacaaggcaactggcta
ctggttggttcgccatggagtggcttccctgagaaccgaatgggagatgtgtacaagtgc
ccggtggacctacccactgccacctgcgaaaagctgaatctgcaaaattcagcaagcatt
tcaaatgttacagagataaagaccaacatgagcctcggtttgaccctcaccaggaatccg
gggaccggcggctttctaacctgtggtcctctgtgggcacatcagtgtggaaatcagtat
tatgcaactggaatttgttctgatgttagtccagactttcagtccttgaccagcttttca
cctgcagttcaagcctgcccttcccttgtagatgttgtagtggtttgtgatgaatcaaac
agtatttatccctgggaagcagtaaaaaattttttggtaaagtttgtgcaaggcctggat
ataggacctaaaaagacacaggtggcattaattcaatatgccaatgagccaagaactgta
tttaacttgaacacttacaacaacaaagaggatatggttatggcaacatctaagacgctc
caagatggtggagacctcacaaacaccttcaaagctatccaatatgcaagagactttgct
tacttactggagtctggtgggcgcccaggtgctacaaaagtcatggtggttgtgactgat
ggcgaatcccatgatgggtcgaaactgaaaaccgtgatccagcaatgcaatgatgacgac
atactgaggtttggcatagcagttcttgggtatttaaacagaaacgatcttgatactaag
aatttaatcaaagaaattaaagcaattgctagtactccaacagagagatactttttcaat
gtggctgacgaagcggctcttctggagaaagctgggactctcggggatcacatattcagc
attgaaggtactgttcaaggaggagacaacttccagatggaaatggctcaagtgggattc
agtgcagattactctcctcaaaatgctattctgatgctaggcgcagtgggagcttttgac
tggagtggaactgttgtccaggagacatctcacgagcacttgatctttcccaagcaagcc
tttgaccaggttctgcaggatagaaaccacagttcgtttctaggttactctgtggctgcg
atttctactgaaaatggtatccactttgtcgctggggcccctcgagcaaattacaccggc
cagatagtgctgtacagcgttaacaagcatggcaatgtgactgtgattcagtctcacaga
ggtgaccagattggctcctattttggcagtgtgctgtgttcagttgatgtggataaagac
accattacagatgtgctcttggtgggtgctcccatgtacatgaatgacctcaagaaagaa
gagggaaaagtctacctgtttacaatcacaaagggcatcttgaatcagcatcagtttctt
gaaggacctgaaggcactgggaatgctcggtttggttcagcaattgcagccctttcagac
gtcaacatggatggctttaatgatgtgattgttggttcacctgtagagaatgagaactct
ggagctgtgtacatttacaatggccaccagggtaccattcgcaccaagtactctcagaaa
atccttggatccgacagagcctttgggaaccatctccagttctttgggaggtccctagat
ggctatgaagatttaaatggggactctatcactgatgtatccattggtgctttggggcaa
gtggttcaactctggtcacaaagcattgctgatgtggccctagaagcttcgttcactcca
gacaaaatcactttgctcaacaaggaagctaagataatcctcaaactctgcttcagagcg
aagtttaaaccttctgggcaaaacaatcaagtagccatcctgtttaatatgacacttgat
gcagacgcctattcatccagagtaacctccagggggatatttaaagaaaatagtgagcga
ttcttgcagaagaaaatggttgtaaatgaagtgcagaagtgttctgagtaccacattagc
atacagaagccctctgatgttgtcaaccctttggatctgcgtgtggacatcagtttggaa
aacccaggcactagccctgcccttgaagcttattccgaaactgtccaagtcttcagtatc
cctttctacaaggagtgtggcagcgatggaatttgcatctctgatctgatcctagatgtc
caacagctgccagcccttcaaaatcagccctttattgtcagtaaccaaaacaagaggtta
gcattttcagtcacactgaaaaacagaggggaaagcgcatacaacaccgcagtcctggtt
gagttttctgagaacttgttttttgcttctttctccatgccggttgatggaacagaagta
acatgccaggttggctcatcgcagaaatctgttacctgtgatgtgggataccctgcctta
aagagtgaacagcaggtgacttttaccattaacttcgactttaatcttcaaaacctccag
aatcaggcggccatcaatttccaagccttcagtgagagccaagaaacaaacaaagcagac
aattcggtcagtctcacaattcctctcctgtatgatgctgaacttcatttaaccagatcc
accaacataaacttttatgagatctcttcggatgagaatgctccttctgtcatcaacagt
gttgaagacattggtcctaaattcatcttctccctcaaggtaacagcaggaagtgctcca
ttgagcatggcactggtcaccatccacattcctcagtacaccaaggaaaagaacccactc
ctgtacttgaccggaatacaaacagacgaggctggtgacatcagctgcgcagcagaagta
aatccactaaagctaccacacaccgcctctcctgtatctttcaaggatgaaaacttccgg
catacgaaagaattggactgcagaaccacttcctgcagtaacatcacctgctggctgaaa
gaccttcacatgaaagcagagtactttatcaatgtgactacaagagtttggaacaggacc
tttgctgcttcaactttccagactgtgcagctgacagcaacagcagagatcgatacgcat
aaccctcagctcttcgtgattgaggaaaatgctgtcacgattcccctcatgataatgaaa
cccacggagaaagcagaagtaccgacaggggttatcataggaagcgtaatagctggaatc
cttttgctgctggctatggttgcagctttgtggaagctcggcttcttcaaaagacagtat
aagaaaatgggccaaaatccagatgagatggatgagaccacagaactcaacagctaa
DBGET
integrated database retrieval system
