Arvicanthis niloticus (African grass rat): 117723956
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Entry
117723956 CDS
T08817
Symbol
Zswim6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
117723956 (Zswim6)
Cilium and associated proteins [BR:
anu03037
]
Other cilia and associated proteins
Stereociliary proteins
117723956 (Zswim6)
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Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
DUF6247
SWIM
Motif
Other DBs
NCBI-GeneID:
117723956
NCBI-ProteinID:
XP_034379448
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All DBs
Position
19:45903050..46068939
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AA seq
1203 aa
AA seq
DB search
MAERGQQPPPAKRLCCRPGGGGGGGGGSSGGGAGGGYSSACRPGPRAGGAAAAVACGGGA
ALGLLPPGKTQSPESLLDIAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREI
CMYSSFNTGGGSSGGPGDDSGGGGGTGGGAGGGGGSSSSPAATSAAAAAVAAGTGTPSVG
AASAADGGDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPAIQSEPETVCNVAISF
DRCKITSVTCSCGNKDIFYCAHVVALSLYRIRKPDQVKLHLPISETLFQMNRDQLQKFVQ
YLITVHHTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASIDDENCWHLDEEQVQEQV
KLFLSQGGYHGSGKQLNLLFAKVREMLKMRDSNGARMLTLITEQFMADPRLSLWRQQGTA
MTDKYRQLWDELGALWMCIVLNPHCKLEQKASWLKQLKKWNSVDVCPWEDGNHGSELPNL
TNALPQGANASQDSSSRPHRTVFTRAIEACDLHWQDSHLQHIISSDLYTNYCYHDDTENS
LFDSRGWPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQQKQLEMFRTQKK
ELPHKSITSITNLEGWVGHPLDPVGTLFSSLMEACHTDEEAFSGFSDCTDNVGQCKSLEY
HHLPAHKFLEEGESYVTLAVEVALIGLGQQRIMPDGLYTQEKVCRNEEQLISKLQEIELD
DTLVKIFRKQAVFLLEAGPYSGLGEMIHRESVPMHTFAKYLFTSLLPHDAELAYKIALRA
MRLLVLESTAPTGDLSRPHHIASVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDVRRL
ETVLESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNW
RRREMVRWLVTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQ
QEKLASSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYTQLFT
IARYMEHRGYPMRAYKLATLAMTHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIP
LVVKSVKCATVLSDILRRCTLTTPGMVGLHGRRNSGKLMSLDKAPLRQLLDATIGAYINT
THSRLTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRE
RFG
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcggacagcagcctcctcccgcgaaacggctctgctgccggccgggcggc
ggcggcggcggcggtggaggcagcagcggcggcggcgcgggtggcggctacagttctgcc
tgtcggcccggcccgcgggcgggcggtgcggcggcggcggtggcgtgcgggggcggcgcg
gcgctggggttgctgccgccgggcaagacccagagccccgagtctctgctggacatcgca
gcgcgcagggtggcggagaagtggccgttccagcgcgtggaggagcgcttcgagcgcatc
ccggagccggtgcagcgccgcatcgtctactggtcctttccccgcagtgagcgggagatc
tgcatgtactcgtccttcaacaccggcggcggctcctcgggcggccccggcgacgacagc
ggcggcggcggcggcacgggcggcggcgcgggcggcggtggcggctcctcatcctcgccg
gccgccacctcagccgccgccgccgccgtcgccgcgggcaccgggaccccgtcggtgggg
gcggccagcgctgcggacggcggcgacgagacgcggctgcccttccgccggggtatcgcg
ctgctggagagtggctgcgtagacaacgtcttgcaagtcggtttccacttgagtggcaca
gtgacagaacctgcaatacaatcggagccagaaaccgtttgcaacgtggccatcagcttt
gatcgttgcaagattacctcagtgacctgcagctgtggaaacaaggacatattttattgt
gcccatgttgtggcactgtctttataccgcatccgcaagccagatcaggtcaaactgcat
cttcccatttcagagactctctttcagatgaacagagaccagctacagaagtttgttcag
tatttgatcacagtgcaccacacagaagtcttgccaactgctcagaagctagcagatgag
attctctcccagaattcagaaattaaccaagttcatggtgctcctgatcctacggcgggt
gctagtattgacgatgagaactgctggcacttggacgaagagcaggtgcaagaacaggtt
aaactgttcctctcccagggagggtaccatggatcagggaagcagcttaacttactcttt
gcaaaggtgcgggagatgttgaagatgagagactccaacggggcccgtatgttgaccttg
atcacagagcagttcatggctgaccctcgcctgtcactttggaggcagcaaggcactgca
atgactgacaagtacaggcagctctgggatgagcttggtgctctgtggatgtgtatcgtt
ttaaacccccactgtaagttggagcaaaaggccagttggttaaaacaactgaaaaaatgg
aacagtgttgatgtctgcccatgggaagatgggaatcatggcagtgaattacccaaccta
accaatgctctgcctcagggtgcaaatgccagccaagattcatcgagcaggcctcatcgg
acagtgttcacaagagccatcgaggcatgtgatctccactggcaggatagccacttgcag
cacattatcagcagtgacctgtacaccaactactgttaccatgacgacactgaaaactcc
ctctttgactcccgggggtggcctctctggcatgaacacgttcctacagcctgtgcaaga
gtggatgcattgcgttctcatgggtaccccagagaagcactgagactagcaatagccatt
gtgaacacattacgacgacaacaacagaaacagttggaaatgttccggactcaaaaaaaa
gagctgccccataagagcataacctcaataaccaatctggaaggctgggttggacacccc
ctagaccccgtgggcactctcttcagtagcctcatggaagcttgccacactgatgaggaa
gccttctctgggttctcagattgtacagacaacgtggggcagtgcaagtccctggagtac
caccatctgcctgcacacaagttcttagaagaaggggaatcctatgtaacactggctgtg
gaggtagccctgatagggctgggccagcagcggatcatgcctgacgggctgtacacacaa
gaaaaagtttgccggaatgaggagcagctcatttctaagcttcaggaaatcgagttggat
gacacactggtgaaaatttttcgcaagcaagcagtcttcctattagaagctggaccatac
agtggcttgggtgagatgatccaccgggagagtgttccgatgcacacgtttgccaagtat
ctcttcacctctctcctacctcatgatgctgaattagcatacaaaattgcactgagagca
atgcggttactagtattggaatctactgctccgacaggagacctctcccgcccccaccac
attgcatccgtcgtccccaaccgataccctcgttggttcactttaagccacattgaatcc
cagcagtgtgagctggcgtccaccatgctaactgcagccaaaggcgatgttcggaggctg
gagacagtattagaatccatccagaaaaacatccactcctcatcacacatctttaagctt
gcccaagatgcatttaaaatagcaactctcatggacagtttgccagacatcactcttttg
aaagtgtctctggagctgggcctgcaggtcatgcgaatgacactgtcaaccctcaattgg
cgacggcgagaaatggtgcggtggctggtgacatgtgctactgaagtcggcgtttatgcc
ctggacagcatcatgcagagctggtttacactctttactcccactgaggccacaagtatt
gttgcaactactgtgatgtccaacagcaccatagtccgcctccacctggactgccaccaa
caggaaaagctggccagcagtgcccggacgctggcattgcagtgcgccatgaaagacccg
cagaactgcgccctctctgcactgaccctctgtgaaaaggatcacatagcttttgagacg
gcctaccaaattgtcctcgatgctgctaccaccggcatgagctacacccagctctttaca
atagcacggtacatggagcaccgtgggtaccccatgagggcctacaagctggccacgctg
gccatgacccatctcaacctgagctacaatcaggacacacaccctgccattaatgacgtt
ctgtgggcctgtgcgcttagtcactcccttgggaagaatgagcttgcagctataatacct
ctggtggtcaagagtgtcaagtgtgcaacggtactgtcagacattctgcgcaggtgcacc
ctgaccacccctggcatggtgggacttcacggaaggaggaactctggcaagctcatgtca
ctggacaaagcccccttgcggcagctcttggatgccacgattggggcctatatcaacaca
acgcactcacgactcacacacatcagtcctcggcactatagtgagtttatcgagttcctc
agcaaggcccgagagactttcctaatggcacatgatggacacattcagtttacacagttt
attgacaacctgaaacaaatctacaaaggcaaaaagaaactgatgatgttggttcgggag
aggtttggttga
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integrated database retrieval system
