Arvicanthis niloticus (African grass rat): 117724054
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Entry
117724054 CDS
T08817
Symbol
Skp2
Name
(RefSeq) S-phase kinase-associated protein 2
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04068
FoxO signaling pathway
anu04110
Cell cycle
anu04120
Ubiquitin mediated proteolysis
anu04150
mTOR signaling pathway
anu05169
Epstein-Barr virus infection
anu05200
Pathways in cancer
anu05203
Viral carcinogenesis
anu05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117724054 (Skp2)
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
117724054 (Skp2)
04150 mTOR signaling pathway
117724054 (Skp2)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117724054 (Skp2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117724054 (Skp2)
05203 Viral carcinogenesis
117724054 (Skp2)
09162 Cancer: specific types
05222 Small cell lung cancer
117724054 (Skp2)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
117724054 (Skp2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
117724054 (Skp2)
Ubiquitin system [BR:
anu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
117724054 (Skp2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_At5g56370
LRR_R13L1-DRL21
F-box_5
Motif
Other DBs
NCBI-GeneID:
117724054
NCBI-ProteinID:
XP_034379579
LinkDB
All DBs
Position
19:28372490..28400862
Genome browser
AA seq
424 aa
AA seq
DB search
MHRKHLQEIPDQSSNVTTSFTWGWDSSKTSELLSGMGVSALEKEEVDSENIPHGLLSNLV
HPQSPPRKRLKSKGSDKDFVIIRRPKLNRENFPGVSWDSLPDELLLGIFSCLCLPELLRV
SGVCKRWYRLSLDESLWQSLDLAGKNLHPDVTVRLLSRGVVAFRCPRSFMEQPLSESFSS
FRVQHMDLSNSVINVSNLHRILSECSKLQNLSLEGLQLSDPVVNTLAQNTALVRLNLCGC
SGFSESAVATLLSSCSRLDELNLSWCFDFTEKHVQSAVAHLPDSITQLNLSGYRKNLQKT
DLCTIIKRCPNLVRLDLSDSIMLKNDCFPEFFQLNYLQHLSLSRCYDIIPETLLELGEIP
TLKTLQVFGIVPDGTLQLLREALPRLQINCAYFTSIARPTMDNKKNPEIWGIKCRLTLQK
PSCL
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcataggaagcaccttcaggagattccggaccagagtagcaacgtcaccaccagcttc
acgtggggatgggattccagcaagacttctgaactgctatcaggcatgggtgtctctgcc
ttggagaaggaagaggtggacagtgagaacatcccacatggactgctctcaaacctcgtc
cacccccagagccctccaaggaaacgactaaagagcaaagggagtgacaaagactttgtg
atcatccggcggcctaagctcaatcgagagaactttccaggtgtttcctgggactccctt
ccagatgagctgctccttgggatcttttcttgtctgtgcctccctgaactgctgagagtg
tctggagtttgcaagaggtggtaccgcctctcgctcgatgagtctctctggcagtcccta
gatctcgccgggaaaaatctgcacccagatgtgactgtgcgcttgctctcccgaggggtg
gtcgccttccgctgcccgcggtcgttcatggagcagccgctgagtgaaagcttcagctct
ttccgtgtacagcacatggacctgtcgaactcagttataaatgtgtcaaacctccacagg
attctgtctgagtgctccaagctgcagaatctaagcctggaaggcctgcagctttcagat
cccgttgtcaatactcttgcacagaatacagccttggtgcgactaaacctctgtggttgc
tctggattttctgagtctgccgtggcgactctgctaagcagctgttccagactggatgaa
ctaaacctctcctggtgctttgactttactgaaaagcatgtgcagtcggctgtggcacat
ttaccagacagcatcacccagctgaacctcagtggctaccgaaagaacctccagaaaaca
gatctttgtaccataattaaacgatgccccaacctcgtccgcctcgacttaagtgacagt
atcatgctaaagaatgactgctttccagaattttttcaactcaactacctccaacacctc
tcgctcagccggtgctatgatataatacctgaaactctacttgaacttggagaaatcccc
acactaaaaacactacaagtttttggaatcgtgccagacggtacccttcagctgctgaga
gaagcccttcctcggctgcagattaactgtgcctatttcacctccattgcaaggccaact
atggacaacaagaagaacccggagatttggggtatcaagtgccgactgactctacaaaag
cccagttgtttatga
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