Arvicanthis niloticus (African grass rat): 117724318
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Entry
117724318 CDS
T08817
Symbol
Hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117724318 (Hps1)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
117724318 (Hps1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
DUF3157
Motif
Other DBs
NCBI-GeneID:
117724318
NCBI-ProteinID:
XP_034379914
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Position
1:complement(149198147..149223417)
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AA seq
719 aa
AA seq
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MKCVLVATEGAEVLFYWTDEEFEESLRRKFRQSENEEEELPVLEDQLSTLLAPVIISSMT
VLEKLSDTYTCFSTENDNHLYVLHLFGECLFIAISGDHSESEGDLRRKLCVLKYLFEVHF
GLVTVDGQLIRKELRPPDLEQRARVWKHFQRLLETYSRLREQEQSFAVEAVERLIHPQLC
ELSIETLERHVVQAVNSSPERGGEEALHAFLLVHCKLLAFYSSHGASTLRPADLLALILL
VQDLQPSQGNTEEEEDDSDRPQPFPQRRPLSSQNIPVQQARSQSTSVPVRSSEETDTDSI
SLPEEYFTPAPSPGEQSSGSLVWLDGGTPPSDVLQMAEDSPKGQAPHSPELSRPRRIFLD
ANIKENYCPLVPHTMYCLPLWPGINMVLLTKSPSTPLALILYQLLDGFSLLEKKLKEGQE
AGSALRSQPFVGDLRQKMDKFIKNRVWQEMQDKFIKNRVGQEIQNAWLEFKNKAFSKSEP
GASWELLQVCGKLKRQLCVIYRLSFLATAPSRGGPCLPQHLQDRAQKLMKERLLDWKDFL
LVKSRRNVTMVSYLEDFPGLVHFIYVDRTTGQMVAPSLSPNEKMSSELGKGPLAAFVKAK
VWALVRLARRYLQKGCTTLLFQEGDFRCSYFLWFENDMGYKLQMIEVPVLSDDSVPIGVL
GGDYYRKLLRFYSKNRPSEPVRCYELLTLHLSVIPTDLLVQQASQLARRLGEASRVTLP
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgtgtgttggtggccactgagggcgcagaagtcctcttctactggacagatgag
gagtttgaggagagcctccggcggaagttcaggcagtcagagaatgaggaagaggagctc
cctgtgctggaggaccagctcagcaccctcctggctccagtcatcatctcctccatgacg
gtgctggagaaactctcagacacgtacacctgcttctcaactgaaaacgacaaccacctg
tatgtcctgcatctgtttggagagtgcctgttcatcgccatcagcggagaccacagcgag
agtgagggggacctgcggaggaagctgtgtgtgctcaagtacctgttcgaggtgcacttc
gggctggtgaccgtggacggccagctcatccggaaggagcttcgtccccctgacctggaa
cagcgtgcccgagtgtggaagcactttcagagactgttggagacctacagccgcctgagg
gaacaggagcaaagctttgctgtggaggcagtggagcggctcattcatccacagctctgt
gaactgagcatcgagacattagagcgacatgtggttcaagctgtcaactccagccctgag
cggggcggtgaggaggccctgcacgccttcctgcttgtacactgcaagctgctggctttc
tactccagccatggtgcaagcaccctgcgccccgcagatcttctggctctcatccttctg
gttcaggacctccagccctcccaaggcaacacagaggaggaagaggatgacagcgacaga
cctcagcctttcccccagaggagacccctaagcagccaaaacatccctgtccagcaggcg
aggagccagagcacctcagttcccgtcaggagttccgaggagacagacacagacagtatc
tctctccctgaagagtacttcacccctgctccttccccgggcgagcagagttcaggtagc
ctcgtctggctggatggtggcaccccgcccagcgatgttctccagatggctgaggacagc
cccaaggggcaggcaccacattccccagaactttccagacccagaaggatcttcctggat
gccaacataaaagaaaactactgtcccttagtgccccacaccatgtactgcctgcccctg
tggccaggcattaacatggtgctgctgaccaagagtcccagcaccccattggccctgatc
ctgtaccagctgctggatggcttctccctactggaaaaaaagctgaaggaaggtcaggag
gccggaagtgccctgcggtctcagccctttgtaggagacctgcgccagaagatggataag
tttatcaagaatcgagtttggcaggagatgcaggacaagtttatcaagaatcgagttggg
caggagattcagaatgcctggctggaatttaagaacaaagccttttctaaaagtgaacca
ggagcatcctgggagctgctccaagtctgtggaaagctgaagcgacagctgtgtgtcatc
taccggctcagcttcctggccactgcacccagcaggggaggaccatgcctgccccagcac
ctgcaggaccgagcccagaaactcatgaaggagcgacttctggactggaaggactttctg
ttggtgaagagccggagaaatgtcaccatggtatcctacctggaggatttcccaggcctg
gttcacttcatctatgtggaccgtacaaccgggcaaatggtggctccttctctcagcccc
aatgaaaagatgtcttccgagttgggcaagggacccctggctgccttcgtcaaagccaag
gtctgggctctggtccgactggcccgcaggtacctgcagaagggctgcaccacattgctg
ttccaggaaggagacttccgctgctcctatttcctgtggttcgagaatgacatggggtac
aaactgcagatgatcgaagtacctgtcctctcagatgactcagtccccattggtgtgctg
ggaggtgactactacaggaagctcctgcgcttctacagcaagaaccgcccctcggagccc
gtcaggtgctacgagctgctcacactgcacctgtctgtcatccccacggacctcctggtg
cagcaggccagccagctggcccggcgcctgggggaggcctctcgggtgaccctgccctag
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