Arvicanthis niloticus (African grass rat): 117724365
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Entry
117724365 CDS
T08817
Symbol
Trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117724365 (Trappc10)
Membrane trafficking [BR:
anu04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117724365 (Trappc10)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
UFD1_N1
SNAP
Motif
Other DBs
NCBI-GeneID:
117724365
NCBI-ProteinID:
XP_034380005
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All DBs
Position
20:complement(42741228..42800543)
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AA seq
1259 aa
AA seq
DB search
MDAPEEPQPPVVYTMENKPIVTCAGDQNLFTSIYPTLSQQLPREPMEWRRSYGRAPKMIH
LESNFVQFKEELLPKEGNKALLTFPFLHIYWTECCDTEVYKATVKDDLTKWQNVLKAHSS
VDWLIVVVENDAKKKNKTNILPRTSIVDKIRNDFCNKQSDRCVVLSDPLKDSSRTQESWN
AFLTKLRTLLLMSFTKNLGKFEDDMRTLREKRTEPGWSFCEYFMVQEELAFVFEMLQQFE
DALVQYDELDALFSQYVLNFGAGDGANWLTFFCQPVKSWNGLVLRKPIDMEKRELIQKQE
ATLLDLRSYLFSRQCTLLLFLQRPWEVAQRALELLHSCVQELKLLEVSVPPGALDCWVFL
SCLEVLQRIEGCCDRAQIDSNIAHMVGLWSYAMEKLKSLGYLCGLVSEKGPNSEDLNRTV
DVLAGLGAERPETANTAQSPYKKLQEALSSVEAFEKHYLDLSHATIEMYTSIGRIRSAKL
VGKDLAEFYMRKRSPQKAEMYLQGALKNYLAEGWALPVTHTRKQLAECQKHLGQMENYLQ
TSSLLASDHHLTEEERKYFCQEILSFASQQEDNPGHKVVLPMHSFARLKDLHFEPPNAVV
HAGGVLTVEMTVCSQMPVPVHVDQIAVNVHFSIEKNNYRKTAEWLTKHKTSNGIITFPAE
ASLFPVSQNSLPALELSEVLERSPSDNALHSTGIICRNVHMLLRKQEGGPSLEPSSALAL
EDGAHVLKCSSVTLQPGANKIAFKTQAKEPGTYTLRQLRASVGPVWFVLAHIHPIVQYDV
YSQEPQLHVEPLADSLLAGIPQKVKFTVTTGHYTVKNGDSLQLSNVEAMLILCQAENRAV
VYSNSREECSTALLRIQSSDKVTSIGLPTAPAYHVIEFELEVLSLPSAPVAGGDTSIPGT
PELHRKQKDSQRDGNCMVTTDHKVSIDCPWSIYSTVIALTFSVPFRTAHSLLSAGTRKYV
QVCVQNLSELDFELSDSNLEDKGHATDLRLAPLNTQSQQLIHSRQAVFFVWELTWTQEPP
PPLHCRFSVGFSPASEERLTVSLKPYTYEFQVENFFTLYSVRAEILPASGAEYCKTGSLC
SLEVSITRLADLLDVDKDEALVESEDYFSTKLMYEVVDNSSNWAVCGKSCGVISMPLAAQ
ATHRVHMEVMPLFAGYLPLPDVRLFKYLPHHSAHASQLDADSWIENDSLSVDKHLDDQLD
CSSLRSRGSTHSTSSSEHKGLPMPRLQALPAGQVFNSSTGMQILVIPSQDDHVLEVSVT
NT seq
3780 nt
NT seq
+upstream
nt +downstream
nt
atggacgcccctgaggagccacagccaccggtggtctacaccatggagaacaagcccatc
gtcacctgtgctggagatcagaatttatttacctccatttatccgacgctctcccagcag
cttccaagagaaccaatggaatggagaaggtcctatggccgggctccaaaaatgattcac
ctggaatccaactttgttcagttcaaggaggagctgctgcccaaagaagggaacaaagcc
ctgctcaccttccccttcctccacatctactggacggagtgctgtgatactgaagtgtac
aaagctacggtaaaagacgacctcaccaagtggcagaatgttctgaaagctcatagctct
gtggactggctaatagtggtagttgaaaatgatgccaagaaaaaaaacaaaaccaacatc
cttccccgaacttctattgtggacaaaataagaaatgacttttgtaataaacagagtgac
aggtgtgttgtgctctctgaccccttgaaggactcttctcgaactcaggaatcctggaat
gccttcctgaccaaactcaggactctgctgctcatgtcttttaccaaaaaccttggcaag
tttgaggatgacatgcggactttgagggaaaagaggacagagccaggctggagcttctgt
gaatacttcatggttcaggaggagcttgcctttgtctttgagatgctgcagcagtttgaa
gatgccctggtacagtacgacgagctggatgccctgttctcacagtacgtgctcaacttc
ggagctggggatggtgccaactggctgacttttttctgccagccggtgaagagctggaac
ggcctggtcctccgcaagcccatagacatggagaagcgcgagctgatccagaagcaagaa
gccaccctgctggacctgcgaagctacctgttctcccgccagtgcaccttgctcctcttc
ctacagcgcccatgggaggtggctcagcgcgccctggagctgctgcacagttgtgtgcag
gagctgaagctcttagaagtctccgtccctcctggtgctttggattgctgggtctttctg
agctgtctggaggtgttacagaggatagaaggttgctgtgaccgggcacagatagattcc
aacattgcccacatggtggggctgtggagctatgccatggaaaagctaaagtccttaggg
tacctgtgtggacttgtgtcagaaaaagggcccaactcggaagatcttaacaggacggtt
gatgttttggcaggactcggagctgagagacctgagacagccaacacagctcagagtcct
tataagaagctgcaggaggcgctgtcatccgtggaggcctttgaaaagcactacttggac
ttgtcccatgccaccattgagatgtatacaagtatcgggcggattcgatctgccaagctt
gttggaaaagatctggcagaattttacatgaggaaaaggtcaccacagaaggcagaaatg
tatcttcagggagctctgaaaaattacctggctgagggctgggccttgcctgtcacgcac
acaaggaagcagctagcggagtgccaaaaacaccttggccaaatggaaaactacttgcag
accagcagccttctggccagcgatcatcacctgacagaggaggagaggaagtacttctgc
caggagatcctcagctttgccagccagcaagaggacaacccaggtcacaaggtggtatta
cccatgcactcgtttgcacggctaaaggatctgcattttgagcctcccaatgctgtggtc
catgcggggggcgtcctgactgtggagatgactgtttgcagccagatgcctgttcctgtc
cacgtggaccagattgctgtcaacgtccacttcagcatcgaaaaaaacaactaccggaag
acagctgagtggctgaccaagcacaagacttccaatggaatcatcaccttcccagccgag
gcctccctgttccctgtgtctcagaacagcctgcctgccctggagttgtcggaggtgttg
gagagaagcccctctgataacgcgctgcacagcacaggcatcatctgtaggaacgtccac
atgctcctgaggaagcaggagggcggcccgtctctagagccgtcctcagcgctggctctg
gaggacggggcccacgtgctgaagtgcagcagtgtgactctgcagccaggtgccaacaag
atagccttcaagacccaggccaaagaacctggaacatacacgctgcggcaacttcgggcc
tcggtgggccctgtgtggtttgtccttgcacacatccaccccattgtacagtatgacgtg
tactctcaggagcctcagctgcatgtggaaccgctggctgatagccttttggctggcatt
cctcagaaagtcaagtttactgttactactggccattacacagtaaaaaacggagacagc
cttcagctcagcaatgtggaagccatgctcatcttgtgtcaggcggagaaccgagctgtg
gtctactccaactcaagagaagagtgttccactgccttgctccggatccagtcctctgac
aaggtcacaagcatcggtcttcctactgcacctgcgtaccatgtgatcgagtttgagctg
gaggttctgtctttaccttcagctccggttgctggcggggacaccagtattccagggaca
ccagagctccacaggaagcagaaagattctcagagagatggcaattgtatggtcaccaca
gatcacaaggtgtccatcgattgcccgtggtctatatactccactgtcattgcactgaca
ttcagtgtgcccttcaggactgcacactctctgctgtctgctggaacccggaaatatgtg
caagtctgtgtccagaacctgtcggaactggactttgagctgtcagacagtaatctggaa
gacaagggtcatgctactgacctgaggctggcacccctgaacacacagtcccagcagctt
atccacagcaggcaggccgtgttctttgtctgggagctgacgtggacacaggagccgccc
cctcctctgcactgccgcttctctgtggggttctccccggcttctgaagagcggctcacc
gtctccttgaagccctacacttacgaattccaagtggagaacttttttacactgtatagt
gtgagagctgagatcttacctgcttcaggagctgagtactgtaagacaggctcgctctgc
tccttggaggtgtctatcacacggctcgctgacctcctggatgtggacaaggatgaagca
ctcgtggaatctgaggactatttttccacaaagcttatgtatgaagttgtggacaacagc
agcaactgggctgtgtgtgggaagagctgtggtgtcatctccatgcctttggctgcccag
gccactcacagagtccacatggaagtgatgcctctgtttgccggttacctccccttgcct
gatgtccgactgttcaagtacctcccccaccactctgctcacgcctctcaactggatgcg
gatagctggatagaaaatgacagcctgtcagtggacaagcacctagacgaccagctggac
tgcagcagcttgcggagtagaggcagtacacactccacttccagcagcgagcacaaaggc
ttgcccatgccccggctccaggcactgcctgctggccaggtcttcaactccagcactgga
atgcagattctggtcattcccagtcaagacgaccacgtcctggaagtcagtgttacctga
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