Arvicanthis niloticus (African grass rat): 117724412
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Entry
117724412 CDS
T08817
Symbol
Pknox1
Name
(RefSeq) homeobox protein PKNOX1 isoform X1
KO
K24891
homeobox protein PKNOX
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117724412 (Pknox1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
117724412 (Pknox1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Meis_PKNOX_N
Homeobox_KN
Homeodomain
DUF7645
Motif
Other DBs
NCBI-GeneID:
117724412
NCBI-ProteinID:
XP_034380090
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Position
20:complement(43532659..43577133)
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AA seq
436 aa
AA seq
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MMATQTLSIDSYQDGQQMQVVTELKTEQDPNCSDPDAEGVSPPPIESQTPMDADKQAIYR
HPLFPLLALLFEKCEQSTQGSEGTTSASFDVDIENFVRKQEKDGKPFFCEDPETDNLMVK
AIQVLRIHLLELEKVNELCKDFCSRYIACLKTKMNSETLLSGEPGSPYSPVQSQQIQSAI
TGTLSPQGIVVPASALQQGNVTMATVAGGTVYQPVTVVTPQGQVVTQALSPGTIRIQNSQ
LQLQLNQDLSILHQEDGSSKNKRGVLPKHATNVMRSWLFQHIGHPYPTEDEKKQIAAQTN
LTLLQVNNWFINARRRILQPMLDSSCSETPKTKKKPAQNRPVQRFWPDSLASGVAQTTPS
ELAMSEGAVVTITTPVNMNVDSLQSLSSDGATLAVQQVMMAGQSEDESVDSTEDEGGALA
PTHISGLVLENSDSLQ
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgatggctacacagacgctaagtatagacagctatcaagatggacagcaaatgcaggtg
gtcacagagttaaaaacagagcaagatcccaactgctctgacccggatgcagaaggagtg
agtcctcctcccatcgagtctcagacgccaatggatgccgacaagcaggccatttatagg
cacccgctatttccattgctagcgttgttgtttgagaaatgtgagcagtccacacagggc
tcagaaggcacgacgtctgccagcttcgatgtggacattgagaacttcgtcaggaagcaa
gaaaaggacgggaagcccttcttctgtgaagatccggagaccgacaacttaatggtgaag
gccatccaggtcctgcgcatccatcttcttgagctggagaaggtcaatgaactctgtaaa
gacttctgtagtcggtacattgcttgtctgaagacgaaaatgaacagcgagaccctgttg
agtggggagcctggaagtccgtactcccctgtgcaatcccagcagattcaaagcgccatc
acaggtactctgagcccccagggaatcgtggtgccagcatcagccctgcagcagggaaat
gtaaccatggcaacagtggcaggtggcacagtgtaccagcctgtcaccgtcgtcacgcca
caaggccaagtggtcacgcaggcgctgtctcctgggacaattaggatccagaactcgcag
cttcagttgcagttgaaccaagacctcagcatcttgcatcaagaggatggctcctccaag
aacaagaggggtgtcctgccgaagcacgccaccaacgtgatgcggtcctggctctttcag
cacatagggcatccctacccaacagaggatgagaaaaagcagattgctgctcagacaaat
ttgacactacttcaagtcaacaactggttcatcaatgcccggaggcggatcctccagcca
atgttggactccagctgttcagagactccaaaaacaaagaaaaagcctgctcagaacagg
ccagtccagaggttctggccagactctcttgcatcaggagtggcacaaacaacgcccagc
gagcttgccatgtcggaaggtgccgttgtgaccatcaccacacctgtgaacatgaacgtg
gacagccttcagtccctgtcctctgacggggccaccctggccgtacagcaggtcatgatg
gcagggcagagtgaggacgagtcggtggatagcacggaggatgagggcggcgcgctggcg
cccacacacatcagcgggctggtgctggagaacagcgactcccttcagtag
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