Arvicanthis niloticus (African grass rat): 117724480
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Entry
117724480 CDS
T08817
Symbol
Rxrb
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X1
KO
K08525
retinoid X receptor beta
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03320
PPAR signaling pathway
anu04659
Th17 cell differentiation
anu04919
Thyroid hormone signaling pathway
anu04920
Adipocytokine signaling pathway
anu04928
Parathyroid hormone synthesis, secretion and action
anu05200
Pathways in cancer
anu05202
Transcriptional misregulation in cancer
anu05207
Chemical carcinogenesis - receptor activation
anu05216
Thyroid cancer
anu05222
Small cell lung cancer
anu05223
Non-small cell lung cancer
anu05226
Gastric cancer
anu05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
117724480 (Rxrb)
09152 Endocrine system
04920 Adipocytokine signaling pathway
117724480 (Rxrb)
03320 PPAR signaling pathway
117724480 (Rxrb)
04919 Thyroid hormone signaling pathway
117724480 (Rxrb)
04928 Parathyroid hormone synthesis, secretion and action
117724480 (Rxrb)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
117724480 (Rxrb)
05202 Transcriptional misregulation in cancer
117724480 (Rxrb)
05207 Chemical carcinogenesis - receptor activation
117724480 (Rxrb)
09162 Cancer: specific types
05226 Gastric cancer
117724480 (Rxrb)
05216 Thyroid cancer
117724480 (Rxrb)
05222 Small cell lung cancer
117724480 (Rxrb)
05223 Non-small cell lung cancer
117724480 (Rxrb)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
117724480 (Rxrb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117724480 (Rxrb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
anu03310
]
117724480 (Rxrb)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
117724480 (Rxrb)
Nuclear receptors [BR:
anu03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
117724480 (Rxrb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
Motif
Other DBs
NCBI-GeneID:
117724480
NCBI-ProteinID:
XP_034380218
LinkDB
All DBs
Position
20:48360235..48366480
Genome browser
AA seq
523 aa
AA seq
DB search
MSWATRPPFLPPRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAGEQQTLEP
EPGEAGRDGMGDSGRDSRSPDSSSPNPLSQGIPPSSPGPPLTPSAPPPPMPPPPLGSPFP
VISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKPPVLGVRGLHCPPP
PGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSCRDNKDCTVDKRQR
NRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGDGAGGAPEEMPVDRILEAELAVEQK
SDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSSLPLDDQVILLRA
GWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRSLSRVLTELVSKMRD
MRMDKTELGCLRAIILFNPDAKGLSNPGEVEILREKVYASLETYCKQKYPEQQGRFAKLL
LRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggccactcgtccgcccttcctcccgccgcggcatgccgcggggcagtgtggg
ccggtgggggtgagaaaagagatgcattgtggggtcgcgtcccggtggcggcggcggcgg
ccctggctggatcccgcggcggcggcggcggcggccggagagcagcaaaccctggagccg
gagccgggggaggctggccgggacgggatgggcgacagcgggcgggattcccgaagccca
gacagctcctccccaaatcccctttcccaggggatccctccctcttctcctggcccacct
cttaccccttcagcacctccacctccaatgccaccccctccactgggctcccccttccca
gtcatcagttcttccatggggtcccctggtctgccccctccggctcccccaggattctcc
gggcctgtcagcagtcctcagatcaactccacagtgtcgctccctgggggtgggtctggc
ccccctgaagatgtgaagccaccggtcttaggggtccggggcctgcactgtccaccccct
ccaggtggccctggggctggcaagcggctttgtgcaatctgcggggacagaagctcaggc
aagcactatggggtttacagctgcgagggctgcaagggtttcttcaagcgcaccattcgg
aaggacctgacctactcgtgtcgtgataacaaagactgtacagtggacaagcgccagcgg
aatcgctgtcagtactgtcgctatcagaagtgcctggccactggcatgaaaagggaggcg
gtacaggaggagcgtcaacgggggaaggacaaagatggcgatggggatggggctggggga
gcccctgaggagatgcctgtggacaggatcctggaggcggagcttgccgtggagcagaag
agtgatcaaggcgttgaggggcctgggggaaccgggggtagtggcagcagcccgaatgac
ccagtgactaacatctgccaggcagctgacaaacagctgttcacgcttgtcgagtgggcg
aagaggatcccgcacttctcctccctacctctggatgaccaggtcatactgctgcgggca
ggctggaatgagctgctcattgcatccttctcccaccggtccattgatgtccgagacggc
atcctcctggccacgggtcttcatgtgcacaggaactcagcccattccgcaggcgtggga
gccatctttgatcggtccctctccagggtgctgacagagctagtgtccaaaatgcgtgac
atgaggatggacaagactgagcttggctgcctgcgggcaatcatactgtttaatccagat
gccaagggcctctccaaccctggagaggtggagatccttcgggagaaggtgtacgcctca
ctggagacctactgcaagcagaagtaccctgagcagcagggccggtttgccaagctgctg
ctacgtcttcctgccctccgctccatcggcctcaagtgtctggagcacctgttcttcttc
aagctcattggcgacacccccattgacaccttcctcatggagatgcttgaggctccccac
cagctagcctga
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