Arvicanthis niloticus (African grass rat): 117724609
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Entry
117724609 CDS
T08817
Symbol
Pou5f1
Name
(RefSeq) POU domain, class 5, transcription factor 1
KO
K09367
POU domain transcription factor, class 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
117724609 (Pou5f1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
117724609 (Pou5f1)
03021 Transcription machinery [BR:
anu03021
]
117724609 (Pou5f1)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117724609 (Pou5f1)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117724609 (Pou5f1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117724609
NCBI-ProteinID:
XP_034380407
LinkDB
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Position
20:complement(50532703..50537064)
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AA seq
352 aa
AA seq
DB search
MAGHLASDFAFSPPPGGGDGSAGLEPGWVDPRTWLSFQGPPSGPGIGPGSEVLGISPCAP
AYEFCGGMAYCGPQVGLGLVPQAGVETLQPEGQAGARVESNSEETSSESCAASPSAVKME
KVEPSPEESQDMKALQKELEQFAKLLKQKRITLGYTQADVGLTLGVLFGKVFSQTTICRF
EALQLSLKNMCKLRPLLEKWVEEADNNENLQEICKSETLVQARKRKRTSIENRVRWNLEN
MFQKCPKPSLQQITAMAKQLGLEKDVVRVWFCNRRQKGKRSSTEYSQREEYEATGTPFPG
GPVSFPLPPGPHFGAPGYGSPHFTTLYSVPFPEGEAFPSVPVTTLGSPMHSN
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggctggacacctggcttcagacttcgccttctcacccccaccaggtgggggtgatggg
tcagcagggttggagccgggctgggtggaccctcgaacctggctaagtttccaagggcct
ccaagtgggcctggaatcggaccaggctcagaggtattggggatctccccatgtgcccca
gcatatgagttctgtggagggatggcatactgtggacctcaggttggactgggcctagtc
ccccaagctggcgtggagactttgcagcctgagggccaggcaggagcacgagtggagagc
aactcagaggaaacctcctctgagtcctgtgccgccagccccagtgctgtgaagatggag
aaagtggaaccaagtcccgaggagtcccaggacatgaaagccctgcagaaggagttagag
caatttgccaagctgctgaagcagaagaggatcactttggggtacacccaggccgacgtg
gggctcaccctgggcgttctctttggaaaggtgttcagccagacaaccatctgccgcttt
gaagctctgcagctcagccttaagaacatgtgtaagctgcgccccctgctggagaagtgg
gtggaggaagccgacaacaatgagaaccttcaggagatatgcaaatcagagaccctggta
caggcccgtaagagaaagcggacaagcattgagaaccgtgtgaggtggaacctggagaac
atgtttcagaagtgtccgaagccctccctgcagcagatcactgccatggccaagcagctt
ggactggagaaggatgtggttcgagtgtggttctgtaaccggcgccagaagggcaaaaga
tcaagcactgagtattctcaacgagaagagtatgaggctacaggaacgcctttcccgggg
gggcctgtatcctttcctctgcccccaggcccccattttggtgccccaggctatgggagc
ccccacttcaccacactctactccgtcccttttcctgagggtgaggcctttccctctgtt
cccgtcactactctgggttctcccatgcattcaaactga
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