Arvicanthis niloticus (African grass rat): 117724664
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Entry
117724664 CDS
T08817
Symbol
Col10a1
Name
(RefSeq) collagen alpha-1(X) chain
KO
K19479
collagen type X alpha
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
117724664 (Col10a1)
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Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117724664
NCBI-ProteinID:
XP_034380476
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Position
20:complement(22617124..22623916)
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AA seq
674 aa
AA seq
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MLPQIPFLLLMSLTLVHGMFYAERYQTPTGIKGPLASPKTQFFIPYAIKSKGIPVRGEQG
IPGPPGPAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGISATGKPGLPGLPGKPGER
GPYGHKGDIGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQQGPTGAPGPRGFPGEKGATG
APGMNGKKGETGYGAPGHPGPQGPPGPPGRPGVGRRGENGFPGQPGIKGDRGFPGETGPS
GPPGPQGPPGKQGREGIGKPGATGSPGQPGIPGEKGYPGAPGIAGPPGTPGFGKQGLPGL
RGQRGPAGLPGAPGAKGEQGPAGHPGEPGLTGSPGNMGPQGPKGIPGNHGIPGAKGESGL
VGPAGPPGARGARGPPGLDGKTGYPGEPGLNGPKGNPGLPGPKGDPGVGGAPGLRGPTGP
IGAKGVPGHNGEAGPRGEPGIPGTRGPIGPPGVPGFPGSKGDPGNPGAPGPAGAATKGLN
GPTGPPGPPGPRGHSGQPGPPGPPGPPGLPGQGVMPDGFIKAGQRPRLSGMPLVSANHGV
TGMPVSAFTVILSKAYPAVGAPIPFDEILYNRQQHYDPRSGIFTCKIPGIYYFSYHVHVK
GTHVWVGLYKNGTPTMYTYDEYSKGYLDQASGSAIMELTENDQVWLQLPNAESNGLYSSE
YVHSSFSGFLVAPM
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgctgccacaaataccctttctgctgctaatgtccttgaccctggttcatggaatgttt
tatgctgagcggtaccaaactcccacaggcataaagggcccgcttgccagccccaagacg
cagttcttcatcccatatgccataaagagtaaagggattccagtaagaggagaacaaggc
attcctggtccaccaggcccagccggacctcgaggacatccaggtccctcaggacctcca
ggaaagccaggctatggaagtcctggacttcaaggagagccagggttgccaggaccacca
ggaatatcagccacagggaagccaggcctgccaggcctgccaggcaaaccaggggagaga
ggaccatatggacacaaaggagatattggcccagctggcctaccaggacctcggggccct
ccagggccccccggaatccctggcccagccggaatttctgtgccaggaaaacctggacaa
cagggacctacaggtgccccagggcctaggggctttcctggagaaaagggggcaacagga
gcccccggtatgaatggaaagaaaggggaaacaggatatggtgctcctggccatccaggc
ccccagggtcccccaggaccccctggccgccctggagtgggaagaagaggtgaaaacggc
tttccaggacagccgggcatcaaaggtgaccggggattcccaggagaaacgggaccatca
ggtccaccagggccacaaggtcctcctgggaagcaaggacgagaaggcattgggaagcca
ggagccactggatcccctggtcagccaggcatcccaggagaaaaaggctacccaggggct
ccaggaatagctgggcctccaggaactcctggctttggaaaacaaggcttgccgggtttg
aggggacagaggggacctgctggtcttcctggggctccaggtgccaaaggggaacaaggg
ccagcaggtcatcctggagaaccaggtctgactggatcccctgggaatatgggaccccaa
ggacctaaaggaatcccagggaaccatggaatcccaggcgctaaaggtgagtcaggtctg
gttgggcctgcagggccccccggggctagaggagcaaggggtccccctgggttggatgga
aaaacagggtatcctggggagccaggtctcaatggtcctaagggtaacccagggttacca
ggcccaaaaggtgatcctggagtgggaggagcccctggtcttcgagggcctactggccct
ataggagctaaaggagtgcctggacacaatggtgaggcagggccaagaggcgaacctgga
ataccaggtaccaggggccccattgggcccccaggtgtcccaggattccctggatctaaa
ggtgaccctgggaacccaggtgctccgggcccagctggcgcagcaactaagggcctcaat
gggcccactggtcccccaggtcctcctggtccaagaggccacagtggacaacctggtccc
ccaggtcccccaggtcccccaggactccccggacaaggagtcatgcctgatggcttcata
aaggcaggccagaggcccaggctttctgggatgcctcttgtcagtgctaaccatggagta
acaggcatgcccgtgtctgcttttactgtcattctctccaaagcttacccagcagtaggt
gcccccatcccatttgacgagattttgtacaacaggcagcagcattatgacccacgatct
gggatctttacctgtaagatcccaggcatatactacttctcctaccacgtgcatgtgaaa
gggactcacgtttgggtaggcctgtataagaatggcacgcccacgatgtacacgtatgat
gagtacagcaaaggctatctggatcaggcttcagggagcgccatcatggagctcacagaa
aatgaccaggtgtggctccagctgcccaatgcagaatcaaatggcctctactcctctgaa
tatgtccactcgtccttctcaggattcctagtggctcccatgtga
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