Arvicanthis niloticus (African grass rat): 117724852
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Entry
117724852 CDS
T08817
Symbol
Lta
Name
(RefSeq) lymphotoxin-alpha
KO
K05468
lymphotoxin alpha (TNF superfamily, member 1)
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04060
Cytokine-cytokine receptor interaction
anu04061
Viral protein interaction with cytokine and cytokine receptor
anu04064
NF-kappa B signaling pathway
anu04668
TNF signaling pathway
anu04940
Type I diabetes mellitus
anu05166
Human T-cell leukemia virus 1 infection
anu05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
117724852 (Lta)
04668 TNF signaling pathway
117724852 (Lta)
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117724852 (Lta)
04061 Viral protein interaction with cytokine and cytokine receptor
117724852 (Lta)
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
117724852 (Lta)
05168 Herpes simplex virus 1 infection
117724852 (Lta)
09167 Endocrine and metabolic disease
04940 Type I diabetes mellitus
117724852 (Lta)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
anu04052
]
117724852 (Lta)
Cytokines and neuropeptides [BR:
anu04052
]
Cytokines
Tumor necrosis fators
117724852 (Lta)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
117724852
NCBI-ProteinID:
XP_034380691
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All DBs
Position
20:complement(49753830..49755946)
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AA seq
202 aa
AA seq
DB search
MTPLGRLHLLRVLGTPPVFLLGLLLALPLGAQGLSSVRFSAARTAHQSPQKHLTHGLLKP
AAHLIGYPSKQNSLLWRANTDRAFLQHGFSLNNNSLLIPTSGLYFVYSQVVFSGESCSPR
AVPTPIYLAHEVQLYSPQYPFHVPLLSAQKSVYPGLQGPWVRSMYQGAVFLLSKGDQLST
HTDGFSHLHFSPSSVFFGAFAL
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgacaccacttggacgtctccacctcttgagggtgctcggcacccctcctgtcttcctc
ctggggctgctgctggccctgcctctaggggcccagggactctccagtgtccgcttctcc
gctgccaggacagctcatcagtcccctcagaagcatctgacccacggcctcctgaaacct
gctgctcatcttattgggtaccccagcaaacagaactcactgctctggagagcaaacaca
gatcgagcctttctccaacacggcttctccttgaacaacaactccctcctgatccccacc
agtggcctctactttgtctactcccaggtggttttctctggggaaagctgctctcccagg
gccgtccctactcccatctacctggcccacgaggtccagctgtattccccccaatacccc
ttccacgtgcctctcctcagtgcacagaagtctgtgtatccggggctacaaggaccgtgg
gttcgctcaatgtaccagggggctgtgttcctgctcagtaagggagaccagctgtccacc
cacaccgatggcttctcccatctacacttcagccccagcagcgtattctttggagcgttt
gctctgtag
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