Arvicanthis niloticus (African grass rat): 117724902
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Entry
117724902 CDS
T08817
Symbol
Atg5
Name
(RefSeq) autophagy protein 5 isoform X1
KO
K08339
autophagy-related protein 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04136
Autophagy - other
anu04140
Autophagy - animal
anu04211
Longevity regulating pathway
anu04213
Longevity regulating pathway - multiple species
anu04216
Ferroptosis
anu04621
NOD-like receptor signaling pathway
anu04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117724902 (Atg5)
04136 Autophagy - other
117724902 (Atg5)
09143 Cell growth and death
04216 Ferroptosis
117724902 (Atg5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
117724902 (Atg5)
04622 RIG-I-like receptor signaling pathway
117724902 (Atg5)
09149 Aging
04211 Longevity regulating pathway
117724902 (Atg5)
04213 Longevity regulating pathway - multiple species
117724902 (Atg5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
117724902 (Atg5)
03029 Mitochondrial biogenesis [BR:
anu03029
]
117724902 (Atg5)
Membrane trafficking [BR:
anu04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
117724902 (Atg5)
Mitochondrial biogenesis [BR:
anu03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
117724902 (Atg5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG5_UblA
ATG5_UblB
ATG5_HBR
DUF6782
Motif
Other DBs
NCBI-GeneID:
117724902
NCBI-ProteinID:
XP_034380770
LinkDB
All DBs
Position
20:complement(13683056..13773293)
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AA seq
275 aa
AA seq
DB search
MTDDKDVLRDVWFGRIPTCFTLYQDEITEREAEPYYLLLPRVSYLTLVTDKVKKHFQKVM
RQDDVSEIWFEYEGTPLKWHYPIGLLFDLLASGSALPWNITVHFKSFPEKDLLHCPSKDA
VEAHFMSCMKEADALKHKGQVINEMQKKDHKQLWMGLQNDRFDQFWAINRKLMEYPPEEN
GFRYIPFRIYQTTTERPFIQKLFRPVAADGQLHTLGDLLREVCPSAVTPEDGEKKSQVMI
HGIEPMLETPLQWLSEHLSYPDNFLHISVVPQPTD
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgacagatgacaaagatgtgcttcgagatgtgtggtttggacgaattccaacttgcttt
actctctatcaggatgagataactgagagagaagcagaaccatactatttgcttttgcca
agagtcagctatttgacgttggtaactgacaaagtgaaaaagcactttcagaaggttatg
agacaagatgatgttagtgagatatggtttgaatatgaaggcacacccctgaaatggcat
tatccaatcggtttactatttgatcttctcgcatcaggttcagctcttccttggaacatc
acagtgcatttcaagagttttccagaaaaggaccttctacactgtccatccaaggatgct
gttgaggctcacttcatgtcctgtatgaaagaagctgatgctttaaagcacaaaggtcaa
gtgatcaacgaaatgcagaaaaaagaccacaagcagctctggatgggactgcagaatgac
agatttgaccagttttgggccatcaaccggaaactcatggaatatcctccggaagaaaat
ggatttcgttatatcccttttagaatatatcagaccacgactgaacggccgtttattcag
aagctgttccgtcctgtggccgcagatggacagctgcatacacttggagatctcctcaga
gaagtctgtccttccgcagtcacccccgaagatggagagaagaagagccaagtgatgatt
cacgggatcgagccgatgctggagacgcctctacagtggctgagtgagcatctgagctac
ccagataactttcttcacatcagcgtcgtcccccagccgacagactga
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integrated database retrieval system
