Arvicanthis niloticus (African grass rat): 143435837
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Entry
143435837 CDS
T08817
Symbol
Rexo1
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
143435837 (Rexo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
anu03009
]
143435837 (Rexo1)
Ribosome biogenesis [BR:
anu03009
]
Eukaryotic type
Pre-60S particles
RNases
143435837 (Rexo1)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
REX3_middle
TIL
Motif
Other DBs
NCBI-GeneID:
143435837
NCBI-ProteinID:
XP_076775541
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All DBs
Position
22:1952415..1973990
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AA seq
1249 aa
AA seq
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MLRSTGFFRSIDCPYWAGAPGGPCRRPYCHFRHRGARGPGAPGSGGTASPAAGLGYDPYN
PELPQPPVQTENGALGQGGGMLELELVNQAIEAVRGEVELEQRRYQELLETARGHSAGAS
ALAPCSPATSMDDGDAFSLALTYTPGGLLSPDAAYQPTPLAVPAEPGHKYSLVPSDGGQG
RAAGAAGALEYVPKAVGQPRRCGRPVSGGKYVVDSSRPSTDLEYDPLSNYSARHLGRATK
RPRGSRGAEPYTPALKKPCDPFGGCEARFSDSEDDVASPPKADIRSPEAGADPESKAPGK
PVSKEGTEHEEAGLRGTKEMAIQCDVEDLEQPPTAPDAVSLVKPSSPARASQDAGIPKEG
KAKKKKSGAPASLSQKSGAPASLSQKSGAPASLSHKGKKDKKKEKDPARPRGKEKVCADR
RKLSASSPRGKAQGPEGTKKKPSSATVSASSGKGGPGCSSSMGPQDSGPGPRAPLAWKGG
SAKKMPSGKLVERKARSLDEGAPQDTPKLKKRALSHAELFGDESEEEDSGLGAGAPRVWP
PTLPSLSSDSESDSDSSLGLGETKVPKRLKAAPPSSPAPPSPFSSSSSSSSSSPSGASQC
AEEGVDYSALEKEVDFDVDPMEECLRIFNESTSVKTEDKGRLARQEPRWPPLPLHPAQKE
DAGFLPTQPASRGSVRLTVQTDRQRGQKRRVSHLCKPGKEAEAPKRTPVATPARPPTAQE
VCYRRAQQAQRGAASWLQAAPRPTERLSSVHISAPGEKRRIAHVPNPRLAATPTGAKRAL
PASSSQVSHGPEPGSQPLKTRTLSGMASKTTTTVTPKRMAHSPSLQSLKKPVIPKEFGGK
VPTVVRQRYLNLFIEECLKFCPSNQEAIEKALNEEKVAYDRSPSKNIYLNVAVNTLKKLR
GLVPSTVPSLSKASGRRVVSHEVVLGGKLAAKTSFSLSRPSSPRVEELKGTALYSRLREY
LLTQEQLKENGYPFPHPERPGGAVIFTAEEKKPKDPSCRICCRCGTEYLVSSSGRCVRTE
ECYYHWGRLRRNRVAGGWETQYMCCSAAVGSVGCQVAKQHVQDGRKENLEGFVRTFQKEL
PEDAHAGVFALDCEMSYTTYGLELTRVTVVDTDMQVVYDTFVKPDNEVVDYNTRFSGVTE
ADLVDTSITLRDVQAVLLSMFSADTILIGHSLESDLLALKVIHGTVVDTSVLFPHRLGLP
YKRSLRNLMADYLRQIIQDNVDGHSSSEDASACMHLVIWKIREDAKTKR
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atgctacgttctaccggtttcttccgctccatcgactgcccatactgggcgggagctccc
ggggggccttgccggcgcccttactgccacttccggcaccgaggagctcggggtcccggc
gctcccggtagcggcggcacagcgtctcccgcagcagggcttggttatgacccgtacaac
ccggagctgcctcagcctcctgtgcagacggagaacggcgctctgggtcagggtggcggc
atgctggagctggaactggtcaaccaggccatcgaggccgtgcgcggggaggtggagctg
gagcagaggcgctaccaggagctcctggagaccgcgcgggggcacagtgctggggcttca
gccctggcaccttgcagccctgccacaagcatggatgacggtgacgccttctcattggct
ctaacttacactccaggtggcctgctgagtccggacgctgcctaccagcccaccccactg
gctgtccctgctgagccagggcacaagtactcactggtcccttcagacgggggtcagggc
agagctgcaggagctgctggtgccctggagtacgtcccgaaggcggtgggccagccgcgc
cgctgtggccgccctgtgtctggtggcaagtacgtggtggatagctcaagaccatcgaca
gatctagagtatgaccccctgtccaactactcggcccggcacctcggcagggccaccaag
cggccacggggctccaggggggctgagccatacacacctgccctcaagaagccctgtgac
ccctttggtggctgtgaggcccggttctcagactcagaagatgacgtggccagcccccct
aaggctgacattaggagccctgaggcaggggctgaccctgaaagcaaagcacctgggaag
cctgtctccaaggagggcacagagcatgaggaggctggccttcggggcaccaaggagatg
gctatacagtgtgatgtggaagacctcgagcagcctcccacggcgccagatgcagtgtcc
ttggtcaagcccagctccccagctagagcctctcaagatgctgggatccccaaggagggc
aaggccaagaagaagaaaagtggggccccagccagcctcagccagaaaagtggggcccca
gccagcctcagccagaaaagtggggccccagccagcctcagccacaagggcaagaaagac
aaaaagaaagagaaggacccagccaggccccgagggaaggaaaaggtgtgtgcagaccgg
aggaagctgtctgccagtagcccccggggcaaggcccaggggcctgaagggaccaagaaa
aagccatcttctgccaccgtctcagccagctcagggaaaggggggccgggctgctcctcc
agcatggggccccaggactctgggcccggtccccgtgcaccactggcctggaaaggtggc
agtgcaaagaagatgccatcggggaagttggtggaacgcaaggcccgctccctggacgaa
ggagccccccaggacacccctaagctcaagaaacgggccctgagccatgctgaactattt
ggggatgagagtgaggaggaggactcaggcctgggagcaggagcgccccgggtgtggccc
ccgaccctgcccagccttagctcagactcagagtcagactccgactccagcctgggcctg
ggtgagacaaaggtgcccaagcgtctcaaggccgcaccgccctcgtcccccgcaccgccc
tccccattctcctcctcctcctcctcctcctcctcctcaccctcgggagccagccagtgt
gcagaggagggtgtggactactcggccctggagaaggaggtagacttcgatgtggaccct
atggaggagtgcctgcgcatcttcaacgagtccaccagtgtgaagacagaggacaagggc
cggctggcccggcaggagcctcggtggccgccgctgcccctgcaccctgcccagaaagag
gatgctggcttcctacccacccagccggcttcccgtggcagcgtccgactgaccgttcag
actgaccggcaaagggggcagaagaggagggtctcacacctgtgcaagccaggaaaggag
gcagaggccccaaagaggacccccgtggctacccctgcaaggcccccaactgctcaggag
gtgtgctaccggcgagcgcagcaggcacagagaggcgccgctagttggctacaggctgcc
ccgcggccaactgagaggctttcctctgtgcacatctcagcaccaggggaaaagaggagg
attgctcacgttcccaacccccgactggctgccacccccacaggtgccaagagggcgctc
cctgccagcagcagccaggtgtcccacggccccgaacctggcagccagccactgaagaca
cgcacattatcagggatggcatctaagacaaccaccaccgtcacccccaagcgcatggcc
cacagcccatcactccagagtctaaagaagcccgttatcccaaaagaatttggcggcaag
gtccccactgtggtccgccagcgctatctcaacctgttcattgaggaatgtctcaagttc
tgtccgtccaaccaggaggccatcgagaaggccctgaacgaggagaaggtggcatatgac
cgcagtcccagcaagaacatatacctgaacgtggccgtgaacactctgaagaagctaagg
ggcctggtccccagcaccgtgcccagcctcagcaaagcgagtggccgcagggttgtgtcc
catgaggttgtactggggggcaaattggcagctaaaaccagcttctccctgagccgcccc
agcagcccgcgggtggaggagctaaaagggactgccctgtacagccgcctcagggaatac
ctgctcactcaggagcagctgaaggagaatggctaccccttcccccacccagagcgccca
gggggcgcagtcatcttcacagctgaggagaagaagcccaaggacccctcctgcagaatc
tgctgccgctgtggcaccgagtaccttgtgtcctcctcaggccgctgtgtgcgcaccgag
gagtgttactaccactgggggcggctacggcggaatcgagtggctgggggctgggagacc
cagtacatgtgctgctcggctgctgtcggctctgtgggctgtcaggtcgccaagcaacat
gtgcaggacggccggaaggagaacctagagggctttgtgcgcaccttccagaaggagctg
cctgaagacgcccacgctggggtctttgcccttgactgtgagatgtcctacactacatat
ggcctggagctgacccgagtcacagtcgtggacacagacatgcaggtcgtgtatgacacc
tttgtcaagcctgacaatgaagttgtcgactacaacaccaggttctcaggggtgaccgag
gccgaccttgtggacacgagcatcactctgcgggacgtgcaggccgtcctgctgagcatg
ttcagtgccgacaccatcctcattggacacagcctggagagcgacctgctggctctcaag
gtcatccacggcacagtggtggacacgtctgtgctgttcccacaccgcctgggcctgccc
tacaaacgctccctgcggaacctcatggctgactacctcagacagatcatccaagacaat
gtggatgggcacagctccagcgaggatgccagtgcctgtatgcaccttgtcatctggaag
atccgagaagacgccaagaccaagcgatga
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