Arvicanthis niloticus (African grass rat): 143435877
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Entry
143435877 CDS
T08817
Symbol
Med16
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 16 isoform X1
KO
K15159
mediator of RNA polymerase II transcription subunit 16
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
143435877 (Med16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
143435877 (Med16)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Tail
143435877 (Med16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med16_bridge
Med16_N
Med16_C
WD40
Beta-prop_WDR3_1st
Beta-prop_IFT140_1st
Beta-prop_WDR35_TULP_N
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_EML
ASA1
Beta-prop_WDR36-Utp21_2nd
Motif
Other DBs
NCBI-GeneID:
143435877
NCBI-ProteinID:
XP_076775664
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Position
22:2579453..2593062
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AA seq
865 aa
AA seq
DB search
MAAPDPGRWGECGPRPPGRLGSRGGQEPGTVLGAVGMMDLAYVCEWEKWTKSTYCPSLPL
ACAWSCRNLIAFTTDLRNDDQDLTHMIHILDTEHPWEVHSVSSGHSEAITCLEWDQSGSR
LLSADADGQIKCWSMADHLANSWESSVGSQVEGDPIVALSWLHNGVKLALHVEKSGASSF
GEKFSRVKFSPSLTLFGGKPMEGWIAVTVSGLVTVSLLKPSGQVLTSTESLCRLRGRVAL
ADIAFTGGGNIVVAAADGSSASPVKFYKVCVSVVSEKCRIDTEILPSLFMRCTTDPNRKD
RFPAITHLKFLARDMSEQVLLCASSQTSSLVECWSLRKEGLPVNNIFQQISPVVGDKQPM
ILKWRILSATNDLDRVSAVALPKLPISLTNTDLKVASDTQFYPGLGLALAFQDGSVHMVH
RLSLQTMAVFYSSAPRSLDEPALKRSRTTCPAVHFKAMQLSWTSLALVGIDNHGKLSMLR
ISPSLGHPLEPKLALQHLLFLLEYCMVTGYDWWDILLHVQPGMVQSLVERLHEEYTRQKP
ALQQVLSTRILAMKASLCKLSPCTVARVCDYHTKLFLMAITSTLKSLLRPHFLNTPDKSP
GDRLAETCAKITDVDIDKVMINLKTEEFVLDMNTLQALQQLLQWVGDFVLYLLVSLPNQG
SPLRPGHSFLRDGTSLGMLRELMVVIRIWGLLKPSCLPVYTATSDTQDSMSLLFRLLTKL
WICCRDEGPASEPDEGLVDECCLLPSQLLVPNLDWLPASDGLVSRLQPKQPLRLRFGRAP
TLPSSTPTLQLDGVTRAPGQPKIDHLRRLHLGAYPTEECKACTRCGCVTMLKSPNETTAV
KQWEQRWIKNCLCGGLWRKVPLSRS
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccggatcccgggcgttggggcgagtgtggaccgcggccccctggccgactt
ggctcccggggcggacaggagccagggaccgtgctgggtgcggtgggtatgatggacttg
gcctacgtgtgcgaatgggagaagtggaccaagagcacatactgcccgtccctgcccctg
gcctgcgcctggtcctgcaggaatctcattgccttcaccacagacctacgcaatgatgac
caggacctgacacacatgatccacatcctagacacggaacacccctgggaagtgcactct
gtcagctctggccacagtgaggccatcacctgcctggagtgggaccagtcagggtcccga
ctcctgtctgctgatgccgacgggcagatcaagtgttggagcatggctgaccacctggcc
aacagctgggagagctcagtgggcagccaggtggagggggaccccatcgtggccctgtcc
tggctgcacaatggggtgaagctggcactgcacgtggagaagtctggtgcctccagcttc
ggagagaagttctcacgtgtgaagttctccccatcactcacactgttcggtggcaagcca
atggagggttggattgcagtgacagtcagtggcctggtgactgtgtccctcctgaagccc
agcgggcaggtgctgacgtccacagagagcctgtgccggctgcgtggccgagtggcgctg
gccgacatcgctttcacaggcggtgggaacatcgtggtggccgctgcggatggcagcagt
gcgtcacccgtgaagttctacaaggtgtgcgtgagcgtggtgagcgagaagtgccgcatc
gacacggagatcctgccctcgctgtttatgcgctgcaccacggatcccaaccgcaaagac
aggttccccgccatcacacacctcaagttcctggcgcgagacatgtctgagcaggtgctc
ctgtgtgcgtccagccagaccagcagcctggtagagtgctggtccctgcggaaagagggc
cttcctgtgaacaacatcttccagcagatctcgcctgtggttggtgacaaacagcccatg
atcctcaagtggcgcatcctgtcggccaccaacgacctggaccgcgtctccgcagtggcc
ctgccgaaactgcccatctcactcaccaacacggatctcaaggtcgccagtgacacccag
ttctatccaggccttggcttagcactggccttccaggacggcagcgtacacatggtgcat
cggctgtccctgcagaccatggcggtgttctacagctcagccccgcgctcgctggatgag
cctgccctgaagcgctcgcgcacgacatgccctgccgtacacttcaaggccatgcagctg
tcctggacttcgctggccctggtgggcatcgacaatcacgggaagctcagcatgctgcgt
atctctccgtccctgggacacccgctggagcccaagctggccctgcagcacctgctgttc
ctgctggagtactgcatggtgaccggctatgactggtgggacatcttgctgcacgtgcag
ccgggcatggtgcagagcctggtggagcggctgcacgaggagtacacacgccagaagccc
gccctgcaacaggtcctctccacccggatcctggccatgaaggcctcgctgtgcaagctg
tcaccctgcaccgtggctcgtgtgtgtgactaccacaccaagctgttcctcatggctatc
acttccaccctcaagtcgctgctgcgcccacacttcctcaacacccctgacaagagccct
ggggaccgcctggccgagacctgcgccaagatcacggatgtggacatcgacaaagtcatg
atcaacctgaagacagaagagttcgtcctggacatgaacactttgcaggcgctgcagcag
ttgctacagtgggtgggagacttcgtgctctacctcctggtcagcctgcccaaccagggc
tccccgctgaggcctggccacagcttcctccgagatggtacctccctgggcatgctgcgt
gagttgatggttgtcatccgaatctggggcctgctgaagcccagctgcctgcccgtctac
acagccacctcggacacccaggacagcatgtccctgctcttccggctgctcaccaagctg
tggatctgctgccgtgatgagggcccagccagtgaaccagatgaaggtttggttgatgaa
tgctgcctgctgcccagccagctgctggtccccaacctggactggcttcctgccagtgac
ggcctggtcagtcgcctgcaacccaagcagcccctgcgactgcgcttcggcagggcaccc
actctgcccagcagcactcccaccctgcagctggacggcgtcaccagggcccctggccag
cctaagattgaccatctccggaggctgcacctgggcgcctaccccactgaggagtgcaaa
gcctgtaccaggtgtggctgtgtcaccatgctgaagtcgcccaacgagacaaccgccgta
aaacagtgggaacaacgctggatcaagaactgcctgtgtggtgggctgtggcgcaaagtg
cctctcagccgttcctga
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