Arvicanthis niloticus (African grass rat): 143436128
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Entry
143436128 CDS
T08817
Symbol
Poc1b
Name
(RefSeq) POC1 centriolar protein homolog B isoform X1
KO
K16482
centriolar protein POC1
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
143436128 (Poc1b)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
143436128 (Poc1b)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
143436128 (Poc1b)
Cilium and associated proteins [BR:
anu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
143436128 (Poc1b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_IFT122_1st
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
EIF3I
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
NBCH_WD40
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_Aladin
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
CFAP251_N
DSE1_N
ASA1
WD40_RFWD3
Beta-prop_Vps41
Ge1_WD40
Beta-prop_RIG_2nd
Beta-prop_SPT8
Beta-prop_WDR41
Beta-prop_WDR19_1st
Beta-prop_SCAP
Beta-prop_NOL10_N
PAC11
eIF2A
Beta-prop_Nup120_160
Beta-prop_NWD2_C
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_IP5PC_F
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
BCAS3_WD40
PD40
Tricorn_2nd
Beta-prop_DCAF12
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_ELP1_1st
Beta-prop_WDR75_2nd
Tricorn_N
Cytochrom_D1
DUF7165
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
143436128
NCBI-ProteinID:
XP_076776187
LinkDB
All DBs
Position
22:22524318..22692767
Genome browser
AA seq
476 aa
AA seq
DB search
MASGPEDPILERYFRGHKAAITSADFSPNGKQIATASWDTFVMLWSLKPHARAYRYVGHK
DVVTSLQFSPQGNLLASASRDRTVRLWVLDRKGKSSEFKAHTAPVRSVDFSADGQFLVTA
SEDKSIKVWSMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCSEDKTIKIWDTTNKQCVN
NFSDSVGFANFVDFNPNGTCIASAGSDHAVRIWDIRMNKLLQHYQVHSCGVNCLSFHPLG
NSLVTASSDGTVKILDLVEGRLIYTLQGHTGPVFTVSFSKDGELFTSGGADAQVLIWRTN
FTQLHYKDPKRNLKRLHFEASPHLLDIYPRSPHSHEDKKETIEINPKLEVMDLQSSSPPV
VDVLSFDSATATDSTCRGMPGKGEDICRYFLNPLLMPECSSTTVKKKPEDVSDLPSESLR
SVPLAVADALEHIMEQLNILTQTVSILEQRLSLTEDKLKDCLDNQQKLFSVVQQKS
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggcccggaggatccgattctggaacgttattttagaggtcacaaagctgcg
atcacctccgctgacttcagccccaacggcaaacaaattgctactgcttcgtgggacacc
tttgtcatgctatggagtttgaagccacacgctagagcttacagatatgtgggccacaag
gatgttgtgaccagcctgcagttctctccacaaggaaacttattagcctctgcctcgaga
gacagaactgttagactctgggttcttgataggaaagggaagtcttcagaatttaaagca
cacacagccccagttcgaagtgtggacttttcagctgatggccagtttttggttacagcg
tctgaagacaaatccattaaagtatggagtatgtaccgtcagcgattcctctactccctg
taccgacatacacactgggtacgctgtgccaaattttcacctgacggaaggttgatcgtg
tcatgtagtgaggataaaactattaaaatttgggacactaccaataagcagtgtgtcaat
aacttctctgactctgtagggtttgcaaattttgtggactttaaccctaatggtacatgc
atagcttcagcaggttctgaccacgctgtgagaatctgggatataagaatgaacaaatta
ctccagcactatcaagttcacagctgcggtgtgaactgtttgtccttccatcctttgggt
aacagccttgtcactgcctcttctgatggaacagttaagattctggatctcgtagaggga
agactcatatacacacttcaaggacatacggggcctgtcttcactgtttcgttttcaaag
gatggagagctctttacttcaggcggtgcagatgcacaggtcttgatatggaggaccaac
ttcactcaattgcactataaagatcctaaaagaaacctcaaaagactgcattttgaggcc
tccccacaccttcttgacatctacccacgatcaccacattcccatgaagacaaaaaggag
actattgaaattaatccaaaacttgaggtaatggatttgcagagttcttctccccccgtt
gtggatgtcctttcttttgattcagccacagcgacggattccacctgtcgaggtatgcca
ggcaagggtgaagacatctgtaggtatttcttgaaccctttgttaatgccagaatgttca
tcaacaactgtgaaaaaaaaaccggaagatgtaagtgacctgccctctgaaagcctgcga
agtgtccctctcgctgtggcggacgctctggagcacattatggagcaactcaacattcta
acccagactgtttcaattctggagcagcgactgtctttgacagaagataagctgaaagac
tgccttgataatcagcaaaagcttttcagtgtcgtgcaacagaagagctga
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