Arvicanthis niloticus (African grass rat): 143436225
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Entry
143436225 CDS
T08817
Symbol
Nup107
Name
(RefSeq) nuclear pore complex protein Nup107
KO
K14301
nuclear pore complex protein Nup107
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03013
Nucleocytoplasmic transport
anu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
143436225 (Nup107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
143436225 (Nup107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
anu03019
]
143436225 (Nup107)
03036 Chromosome and associated proteins [BR:
anu03036
]
143436225 (Nup107)
Messenger RNA biogenesis [BR:
anu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
143436225 (Nup107)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
143436225 (Nup107)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF8594
Motif
Other DBs
NCBI-GeneID:
143436225
NCBI-ProteinID:
XP_076776425
LinkDB
All DBs
Position
22:complement(39542644..39586000)
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AA seq
924 aa
AA seq
DB search
MDRSFRGMSTPVIREVEVTRTARKHSAHKRVLIQANQDENFGTTTPRSQIIPRTPSSSRQ
PFTPPSRSLLRQPDISYILGTEGRSPRHTQSSGYLGNLSMVTNLDDSNWAAAFSSQRLGF
YANTEHHSVTEDVNLSTVMLREDDPGEAASMSMFSDFLQSFLKHSSTTVFDLVEEYENIC
ASQVNILSKIVSRATPGLQKFSKTASMLWLLQQEMVTWRLLASLYRDRIQSSLEEENMFA
IAGINASEKTVVEALFQRDSLVRQSQLVVDWLESTAKDEIGDFSDNIEFYAKSVYWENTL
HSLKQRQLLSYIGSTRPLVTELDPDAPIRQRMPLDDLDREDELRLLKYLFTLIRAGMTEE
AQRLCKRCGQAWRAATLEGWKLYHDPNVNGGTELEPVEGNPYRRIWKISCWRMAEDELFN
KYERAIYAALSGNLKQLLPVCDTWEDTVWAYFRVMVDSLVEQEIRTSVMTLDEAEELPRE
YMEANWTLEKVFEELQATDKKRVLEENQEHYHIVQKFLILGDIDGLMDEFSKWLSKSKSS
LPGHLLRFMTHLILFFRTLGLQTKEEVSIEVLKTYIQLLISEKHTNLIAFYTCHLPQDLA
VAQYALFLEGVTEFEQRHQCLELAKEADLDVATITKTVVENIRKKDNGEFSHHDQAPSLD
TGTTEEDRLKIDVIDWLVFDPAQRAEALRQGNAIMRKFLALKKHEAAKEVFVKIPQDSIA
EIYNQWEEQGMDSPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPQKPTLLSQAT
FTEKVAYEHKEKKYEMDHNIWKGHLDALTADVKEKMYNVLLFVDGGWMVDVREDAEDDPE
RTHQMVLLRKLCLPMLCFLLHSILHSTGQYQECLQLADMVSSERHKLYLVFSKEELRKLL
QKLRESSLMLLDQGLDPLGYEIQS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggacaggagcttccgggggatgtcaacccctgtgatccgagaggtggaggtaacgagg
actgcacggaagcacagtgctcacaaaagagttctaattcaggccaaccaagatgaaaat
tttggtactactacaccaagaagccagattattcctcgaactccaagctcatctcgacag
ccttttacgccaccaagccgaagcttactcagacagccagatatttcctacattctcgga
acggaggggaggtctccccggcacacacagtcttctgggtacttgggaaatctctccatg
gtgactaacctagatgacagcaactgggcagctgcattctcatcccagcgtttagggttc
tatgcaaacacagagcaccatagtgtgaccgaggacgtaaacctaagtactgtcatgcta
cgtgaagacgaccctggagaggctgcatccatgagtatgttctctgatttcctgcagtct
ttcttgaagcactcttcaaccactgtctttgatcttgtagaagagtatgaaaatatctgt
gctagtcaggtgaatatcctgagtaaaatagtgagccgagcgacgcctggactgcagaag
ttttccaagacggccagcatgctctggctgcttcagcaggagatggtcacgtggaggctg
ctcgcctctttgtatagagacagaatacagtcttcattggaagaggaaaatatgtttgca
attgctggtattaatgccagcgagaagacagtagtggaagcgctgtttcagagggactca
ctggtgcggcagagccagttggtggtggactggctagagagcactgccaaagacgagatt
ggagatttctccgacaatattgagttttatgcaaaatcagtatattgggaaaataccctt
cattccttaaagcaacggcagctactgtcttatataggaagtacccgtcctcttgtcact
gaactggacccagacgcccccattagacagagaatgccacttgatgacctggacagagaa
gatgagctccggctgctgaagtacctcttcactctcatccgggccgggatgacagaagag
gcacaacggctctgtaaacggtgtgggcaagcatggcgagctgcaaccctggaaggctgg
aaactgtaccatgaccctaatgttaatggagggacagagctagaacctgtggaaggcaat
ccatatagacggatctggaagattagttgctggagaatggctgaagatgaactttttaat
aaatatgaaagagccatttatgcagcgttgagtggaaatcttaagcagctccttccggtc
tgtgacacctgggaagacacagtgtgggcttacttccgggtgatggtggacagcctggtg
gagcaggagatccggacatcggtgatgacgctggatgaagccgaggagctccctcgagag
tacatggaagcgaattggaccttagagaaagtttttgaagaacttcaagccactgataaa
aagagagttctggaagagaatcaagaacattaccatatagttcagaaatttcttatcctg
ggagacattgatggtttgatggatgaatttagcaaatggctgtccaagagcaagagcagt
ctacccggacacctcctccgctttatgacacacctcattctgtttttccgcaccctggga
ctacaaaccaaagaagaagtttccattgaagttctaaagacatatatacagctgttaata
agtgagaagcacacaaacctcatagcgttctatacctgtcatttgcctcaagacctcgcc
gttgcccagtatgccttgtttttggaaggtgttacagaatttgagcaacggcaccagtgc
ctcgagctggctaaggaagcagatttggatgttgcaacgataacaaaaaccgtagttgag
aatattcggaagaaagataatggtgaatttagtcaccatgaccaggctccatctctagat
actggcactactgaggaggaccgcctgaagatagatgtgattgactggctggtgtttgac
ccagcacagagagcagaagccctgaggcaaggcaacgccatcatgaggaagttcttagca
ttaaagaagcatgaagctgcaaaagaagtgtttgtgaaaattccccaggattccatcgca
gagatctataatcagtgggaggagcaaggcatggacagccctcttcctgctgaggatgac
aacgctatccgagagcacttgtgtatccgagcctatctggaagcccatgaaaccttcaat
gagtggtttaaacacatgaattcagctccacagaagcctacattgctgtctcaggcaact
tttacagagaaagtggcctatgaacacaaagaaaagaagtacgagatggatcataatatt
tggaaaggacatttggatgccctaactgctgatgtgaaggagaaaatgtacaacgtcttg
ttgtttgttgatggaggatggatggtggatgtcagagaggacgccgaggacgaccctgaa
cggacgcatcagatggttttactgagaaagctctgtctccccatgctgtgcttcctgctt
cacagcatactgcacagcaccgggcagtaccaggagtgcctgcagctggccgacatggtg
tcctctgagcgccacaagctctacctggtattttctaaggaagagctaaggaaactgctg
cagaagttaagggagtcctctctgatgctcctggaccagggccttgacccgcttggctat
gagatccagtcataa
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