Arvicanthis niloticus (African grass rat): 143436812
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Entry
143436812 CDS
T08817
Symbol
Syne3
Name
(RefSeq) nesprin-3 isoform X1
KO
K21761
nesprin-3
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
143436812 (Syne3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
anu03036
]
143436812 (Syne3)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
143436812 (Syne3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin_SYNE1_2
SYNE3
KASH
Spectrin
ADY4_C
DUF3288
Spectrin_SYNE1
Motif
Other DBs
NCBI-GeneID:
143436812
NCBI-ProteinID:
XP_076777385
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All DBs
Position
23:13888105..13971294
Genome browser
AA seq
998 aa
AA seq
DB search
MRPFTLCQGAGFWANRRAFTGAMTQQPQEDFDRSVEDAQAWMKVVQEQLQVNDNTKGPRA
ALEARLRETEKICQLEPEGGMKVELVLRAAEALLATCQEGQKPEILAQLRDIKSQWEETV
TYMTHCHSRIEWVWLHWSEYLLAQDEFYRWFQKMLVTLEPPVELQLGLKEKQWQLSHAQV
LLHNVDNQAVLLDRLLEEAGSLFSRIGDPSVDEDAQKRMKAEYDAVKARAQHRVDLLAQV
AQDHEQYREDVNEFQLWLKAVVERVHSCLGRNCKLATELRLSALQDIAKDFPRGEETLNR
LEEQAVGVIQNTSPLGAEKISGELEEMRGVLEKLRVLWKEEEGRLRGLLQSKGACEQQIQ
QLEAELGEFKKSLQRLAQEDLEPSLKAATEDELVAQWRLFSGTRAALASEEPRVDRLQTQ
LKKLVTFRDLEPLSDSVVAALQEYQRMKGKNARLHNATRAELWQRFQRPLNDLQLWKALA
QRLLDITTSLPDLASIHTFLPQIEAALTESSRLKEQLAMLQLKADLLGSIFGQERAATLL
EQVTSSVRDRDLLHNSLLQRKSKLQSLLVQHKDFGVAFDPLHRKLLDLQARVQAEKGLQR
DLSAKQVQLLRLQGLQEEGLDLGTQIEAVRPLAHGNSKHQDRIDQIASDQQALQRSLEDL
VDRCQQNVRDHCTFSHRLLELQQWITMATQTLESHQGDVHSWDTESREAGLERLLSEIPE
KEVQLSLLQALGQLVMKKSSPEGAAVVQEELRKLMESWQALQLLEESVLSLMRNQQLQRT
EVDTGKKQVFTNNIPKAGFLINPQDPIPRRRHGANPLEEHDVHEDDPQLLRDFEQWLQAE
NSKLHRIVTMRAATAKDLRTREVKLQELEARIPEGQHLFENLLRLRLARDPSNELEDLRY
RWMLYKSKLKDSGHLLTESSPGELTAFQKSRRQKRWRSPCSLLQKACRVALPLQLLLLLF
LLLLFLLPAGEEERSCALANNFARSFALMLRYNGPPPT
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcctttcactctctgtcaaggtgccggcttctgggcaaacagaagagctttcaca
ggtgcgatgactcagcagccccaggaagactttgacaggagcgtggaggatgcccaggca
tggatgaaggtggtacaggagcagcttcaggtcaatgacaacacgaaggggccccgagcg
gccttggaggcgaggctgcgagagacagagaaaatctgccagctggagcctgaaggaggc
atgaaggtggaactggtcctgcgggcggctgaggccctcctggcaacttgccaggagggc
cagaaacctgagatcctggcccagctgagggatatcaagtctcagtgggaagagacagtc
acctacatgactcactgccacagtcgcatcgagtgggtgtggctgcactggagcgagtac
ctgctggcccaggatgagttttaccgttggttccagaagatgctggtcacgctggagccc
cccgtggagctgcagctgggcctgaaggagaagcagtggcagctgagccatgcccaggtg
ctgctacacaatgtggacaatcaggctgtgctcctggacaggctactggaggaggcgggc
tccctgttcagcaggattggggaccccagcgtggatgaagatgcccagaagaggatgaag
gctgaatacgatgctgtgaaggccagagcccagcacagggtggacctcctggcccaggtg
gcccaggaccatgagcagtaccgggaggatgtgaacgagttccagctgtggctgaaggcg
gtggtggagagagtgcacagctgcctggggcgaaactgcaagctggctacggagcttcgc
ctgtctgcactgcaggacatcgccaaggatttccctaggggtgaggagactttgaacaga
ttggaggagcaggctgtgggtgtcattcagaacacctctcctttgggtgcagagaagatc
tcaggagagctggaggagatgcggggagtcctggagaagctgagagtcctctggaaagag
gaggaaggaagactgaggggcctgctccagtccaagggggcctgtgaacagcagatccag
cagctggaggcagaactgggagagttcaagaaaagcctgcagaggctggcccaggaggac
ttggagccctctttgaaggcagccacagaggacgagctggtggcccagtggaggctgttc
tcagggactcgggctgcactggcttcagaggaaccccgtgtagaccggttgcaaactcaa
ctgaagaaacttgtcactttcagagacctggagccgctctctgacagtgtggtggctgcc
cttcaggaataccaaagaatgaaggggaagaatgccaggctccacaatgcgaccagggca
gagctgtggcagcgtttccagcggcctctcaatgacctgcagctgtggaaggccctggcc
cagaggctccttgacatcaccaccagcctgcccgacctggcctccattcacacttttcta
ccccagattgaggcagccctaacggaaagctcccgcctgaaagagcaactggccatgctt
cagctgaaggcggaccttctaggcagcatctttggccaggagagagcagccaccctcctg
gagcaggtgacaagttctgtgagggacagagacctactacataacagccttcttcagcgg
aagagcaaacttcagagcctgctcgttcagcacaaggactttggggtggcttttgatccc
ctacacaggaagctcctagacctccaagccagggtccaggcggagaaagggcttcagcgg
gacctttctgcaaagcaggtccagctcctgaggttgcaggggctgcaggaggaggggctg
gatctggggacacagatcgaggctgtgaggcctcttgcccatgggaactctaagcaccag
gacagaatagaccagatcgcctctgaccagcaagccctgcagaggtccctggaggacctt
gtggacaggtgtcagcagaatgtacgggaccactgtaccttcagtcacaggctgttggag
ctgcagcaatggatcaccatggccacacagacattggagtcacaccaaggggatgtgcat
tcgtgggatactgagtcccgagaggctggactcgagaggctgctgtctgaaatcccagag
aaagaggtccagctgtccctgctccaagcactgggccagcttgtgatgaagaagtcttcc
ccagagggggcagctgtggtccaggaggagctgaggaagctgatggagtcttggcaggcc
ctgcagctactagaggagagtgtgctgagtctcatgagaaaccagcagctgcagaggaca
gaggtggacactgggaagaagcaggttttcaccaacaacatcccgaaggctggctttctc
atcaatcctcaggatcccattcccaggagacggcatggggcaaacccactggaagaacat
gacgtccatgaagatgatccccagctcctgagggactttgaacagtggctgcaggcagag
aactccaagctacatagaatcgtcacaatgagagcagccacagccaaggacttgaggacc
agggaggtgaagctgcaggagctggaggctcgaatcccagaaggccagcacctctttgag
aacctgcttcgtctcaggctcgcaagggacccttccaatgagctggaagacctgcgctac
cggtggatgttatacaagtccaagctcaaggactctggccacctgctgacggagagttct
ccaggggagctgactgcattccagaagagtcgaaggcagaagcggtggcggagtccctgc
tctctcctacagaaagcatgccgcgtggcgctgccattgcagctgctgctcctgctcttt
ctgctgctgctgttcctgctgccggcgggcgaggaggagcgcagctgcgccctggccaac
aacttcgcccgctcctttgcgctcatgcttcggtacaacggccccccgcccacctag
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