Arvicanthis niloticus (African grass rat): 143436879
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Entry
143436879 CDS
T08817
Symbol
Psmc1
Name
(RefSeq) 26S proteasome regulatory subunit 4 isoform X1
KO
K03062
26S proteasome regulatory subunit T2
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03050
Proteasome
anu05010
Alzheimer disease
anu05012
Parkinson disease
anu05014
Amyotrophic lateral sclerosis
anu05016
Huntington disease
anu05017
Spinocerebellar ataxia
anu05020
Prion disease
anu05022
Pathways of neurodegeneration - multiple diseases
anu05165
Human papillomavirus infection
anu05169
Epstein-Barr virus infection
anu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
143436879 (Psmc1)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
143436879 (Psmc1)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
143436879 (Psmc1)
05165 Human papillomavirus infection
143436879 (Psmc1)
09164 Neurodegenerative disease
05010 Alzheimer disease
143436879 (Psmc1)
05012 Parkinson disease
143436879 (Psmc1)
05014 Amyotrophic lateral sclerosis
143436879 (Psmc1)
05016 Huntington disease
143436879 (Psmc1)
05017 Spinocerebellar ataxia
143436879 (Psmc1)
05020 Prion disease
143436879 (Psmc1)
05022 Pathways of neurodegeneration - multiple diseases
143436879 (Psmc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
anu03051
]
143436879 (Psmc1)
Proteasome [BR:
anu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
143436879 (Psmc1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_2
AAA_22
DUF815
nSTAND3
AAA_5
RuvB_N
AAA_16
AAA_14
AAA_28
AAA_25
IstB_IS21
AAA_3
RNA_helicase
ATPase
TIP49
AAA_11
NPHP3_N
Mg_chelatase
AAA_33
AAA_7
AAA_24
Parvo_NS1
PhoH
NACHT
ABC_tran
Prot_ATP_ID_OB_N
NB-ARC
TsaE
AAA_30
AAA_18
Motif
Other DBs
NCBI-GeneID:
143436879
NCBI-ProteinID:
XP_076777537
LinkDB
All DBs
Position
23:complement(18091125..18105848)
Genome browser
AA seq
440 aa
AA seq
DB search
MGQSQSGGHGPGGGKKDDKDKKKKYEPPVPTRVGKKKKKTKGPDAASKLPLVTPHTQCRL
KLLKLERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KKRIFQIHTSRMTLADDVTLDDLIMAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggtggccatggtcctgggggtggcaagaaggatgacaaggac
aagaaaaagaaatacgaacctcctgtcccaactagagtggggaaaaagaagaagaaaaca
aagggaccagatgccgccagcaaactgccactggtaacacctcacacccagtgccgtctg
aaattgctgaagcttgagaggataaaagactatcttctcatggaggaggagttcattaga
aaccaggaacagatgaaacccttagaagaaaagcaagaggaggaaagatcaaaagtggat
gatctcagggggacccccatgtctgtaggaaccttggaagagatcattgatgataatcac
gccattgtgtctacatctgtgggctcagaacactatgtcagcatcctgtcatttgtagac
aaggatctgctggaaccaggctgttcagtcctgctcaaccacaaggtgcatgctgtgatc
ggggtgctcatggatgacacggatcctctggttacagtgatgaaggtggaaaaggccccc
caggaaacctacgcagatattgggggactggacaaccagatccaggaaattaaggagtct
gtggagcttccccttacccatcctgagtattatgaagaaatggggataaagccccctaag
ggggtcattctctacggtccgccaggaacaggtaaaactctattggccaaagcagtagcg
aaccaaacttcagccactttcttgcgagtggttggttcagaacttattcagaagtaccta
ggtgacgggcccaagctcgttcgggagctcttccgggttgctgaagaacatgcaccatcc
attgtgttcattgatgagattgacgccattgggaccaaaagatatgattcaaactctgga
ggcgagagagaaattcagcgaacaatgttggagctgttgaaccagttggatggatttgac
tcaaggggagatgtaaaagttatcatggccacaaaccgaatagaaactttggatccagca
cttatcagaccaggccgcattgacagaaagatcgagttccccctgcctgacgagaagacc
aagaaacgtatcttccagattcacacaagcaggatgacgctggctgatgatgtgaccttg
gatgacttgatcatggcaaaggatgacctctctggggctgacatcaaggcaatctgtaca
gaagctggcttgatggccttgcgggaacgcagaatgaaagtaacaaatgaagacttcaaa
aaatctaaagagaatgttctttataaaaagcaagaaggcacccctgaggggctgtatctc
tag
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