Arvicanthis niloticus (African grass rat): 143437348
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Entry
143437348 CDS
T08817
Name
(RefSeq) recQ-mediated genome instability protein 1-like
KO
K10990
RecQ-mediated genome instability protein 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
143437348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
anu03400
]
143437348
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
143437348
FA (Fanconi anemia) pathway
143437348
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
Motif
Other DBs
NCBI-GeneID:
143437348
NCBI-ProteinID:
XP_076778259
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Position
Y:557602..560361
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AA seq
616 aa
AA seq
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MNAASAVSRVKTWLLAAWHVKVPRMWLEACVNWIQEENNNANLSQAQINKQVLEQWLLTV
LRNLEHPLLPDDILEIPKGELNGFYAPQINSLVDVSQPVYSQIQKLRGKNTTNDLVSAET
QSTPKPWEVRSSWMLMLPLTDGVTQIQGMEYQSIPALHSALPPGTKILVHGHILFRLGVL
LLKPENVKVLGGEVDGLSEEYAQEKVLARLIGELDPTVSVIPNHSNHSVPRVSGGLDAVL
GPSDEELLASLDENEEPAANVTMERSCFSTGSSSNTIWTNQSSFEPGCNISSRPKEKTPN
QPMHFTDGEFDDFSLEEALLLEETVQKEQMETKASQPLTLKENINIRKCVEIFSHKPSSL
NHTTLIHKQGNSNFNEKISELMIHEDKFFDCSSTRDNHKRLLAHDLTNESKISEVDDIAQ
QTISSSDEHCLSNKILNRKLDISEKSSQISKENGFPFQACSSRSFENNTCLSIGMDLHSP
PFIYLSVLMARKPKEVTTVKVKAFIVTLTGNLSSSSGSWCVTAKVSDGTAYLDVDFIDEI
LTSMIGYSVPEMKQLRKDPLKYKKFLEGLQKCQRDVIDVCCLMTISFNPSSCKGMVLEFQ
DVGMEHLEDLKKRLNK
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcagctagtgctgtatcaagagttaagacatggctcttggcagcatggcatgtt
aaagtgcctcggatgtggctggaagcttgtgttaactggatccaagaagaaaataataat
gctaatttgagtcaggcacaaataaataaacaggtgttagaacaatggcttcttactgtc
ctgagaaacttggaacatcctctcttacctgatgacattttagaaattccaaagggagaa
ctgaatggattttatgctccacagatcaattcgttggttgatgtaagtcaacctgtgtat
tcccagatacaaaagctgagaggaaagaatacaaccaatgatctagtttcagctgaaaca
cagagtactccaaaaccatgggaagtaaggtcttcatggatgctaatgctgccgctcact
gatggggtcacacaaattcagggaatggaatatcagtctattccagctctccatagtgct
cttcctccgggtacaaaaattttagttcatggacacattttgttccgtcttggcgttctc
ttactgaaaccagaaaatgtgaaggtgttaggaggtgaggtagatggtctttcagaagaa
tatgcccaagaaaaagtacttgcaagattaattggtgaactcgatcctacagtttcagtc
attccaaatcactccaatcacagtgtacccagagtttcagggggtttagatgctgttttg
gggccttcggatgaagaactcttggcaagtcttgatgaaaatgaagagcctgcagcaaat
gtgactatggaaagaagctgtttcagcacaggtagttcctcaaacactatttggacaaat
cagtctagttttgagccaggatgtaatatttcttcaaggccaaaggaaaaaacaccaaac
cagcctatgcatttcactgatggagaatttgatgacttctcactagaagaggccttgctt
ttggaagaaactgtccagaaagaacagatggaaacaaaagcatcacagccactaactttg
aaggaaaacataaacatacgtaaatgtgtggagatcttttcacataaacctagtagtcta
aaccacacgactttgattcataaacaaggaaacagcaatttcaatgaaaaaatatctgaa
ctaatgattcatgaagacaaattttttgactgttcatctactagagacaatcataagaga
ctcttagctcatgatcttacaaatgaaagtaagatttcagaagtagatgatatagcacaa
caaaccatcagcagttcagatgaacattgcttaagtaataaaatattaaacagaaagctg
gacatatcagaaaagagttcacaaatttctaaagaaaatggcttccctttccaggcttgt
tcttcaagatcatttgagaataatacttgtctttctattggcatggacttacattctcca
ccctttatctatttgtctgttctaatggccagaaagccaaaggaagttaccactgtgaaa
gttaaagcatttattgtcactttaactggaaatctctcaagttctagtggctcttggtgt
gtaactgcaaaggtttctgatggtactgcatatctagatgtagattttatagatgaaata
cttaccagtatgatagggtattcagtaccagaaatgaaacaattaagaaaggaccctctt
aaatataaaaaattcctagaagggttacaaaaatgtcagcgagatgtgatagatgtgtgt
tgcctaatgactatttcatttaatccttcttcatgtaaaggcatggtattggaatttcaa
gatgttggtatggaacaccttgaggacctaaagaaacggttgaataaataa
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