Arvicanthis niloticus (African grass rat): 143437546
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Entry
143437546 CDS
T08817
Symbol
Ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
anu03037
]
143437546 (Ttc28)
Cilium and associated proteins [BR:
anu03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
143437546 (Ttc28)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_14
TPR_SusR
Rapsyn_N
RPN7
TPR_17
DUF6340
TPR_16
TPR_11
TPR_BSK1_C
TPR_19
TPR_6
TPR_NPHP3
TPR_9
ANAPC5
TPR_YpiA_C
OrgC
T4SS
Motif
Other DBs
NCBI-GeneID:
143437546
NCBI-ProteinID:
XP_076778498
LinkDB
All DBs
Position
24:1574440..2007500
Genome browser
AA seq
2450 aa
AA seq
DB search
MEQPPPLAPEPASARSRRRREPESPPAPIPLFGAKTIVQRSPDEPALSKAEFVEKVRQSN
QACHDGDFHTAIVLYNEALAVDPQNCILYSNRSAAYMKTQQYHKALDDAIKARLLNPKWP
KAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRDTLEPTYQQL
QKMKLDKSPFVVVSVVGQELLTAGHHGASVVVLEAALKIGTCSLKLRGSVFSALSSAHWS
LGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMK
LKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDDLSEARELGNMGAVYIA
MGDFENAVQCHEQHLRIAKDLGSKREEARAYSNLGSAYHYRRNFDKAMSYHNCVLELAQE
LMEKPIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQM
KGDYDTALKLHKTHLCIAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISME
VNDRASQASTHGNLAVAYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCS
RGEYVQAAPYYEQYLRLAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKD
LHDKLSQAKAYCNLGLAFKALLNFTKAEECQKYLLSLAQSLDNSQAKFRALGNLGDIFVC
KKDVNGAIKFYEQQLGLSHHVKDRRLEASAYAALGTAYRMVQKYDKALGYHTQELEVYQE
LSDLPGECRAHGHLAAVYMALGKYTMAFKCYQEQLELGRKLKEPSLEAQVYGNMGITKMN
MNVMEDAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEALGDYEEAIKHYEQYLSV
AQSLNRMQDQAKAYRGLGNGHRATGSLQQALVCFEKRLVVAHELGEASNKAQAYGELGSL
HSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI
AEETDNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLVAKTVSYSSLGRT
HHALQNYSQAVMYLQEGLRLAEQLGRREDEAKIRHGLGLSLWASGNLEEAQHQLYRASAL
FETIRHEAQLSTDYKLSLFDLQTSSYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVE
RQTGQQDSDPYSPITIDQILEMVNAQRGLVLYYSLAAGYLYSWLLAPGAGILKFHEHYLG
DNSVESSSDFQAGSSATLPVATSSTLEQHIASVREALGVESYYSRACASSETESEAGDIM
EQQLEEMNKQLNSVTDPTGFLRMVRHNNLLHRSCQSMTSLFSGTVSPSKDGTSSLPRRQN
SLAKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLVLVLEGELYLVPFALLKGSASNEYL
YERFTLIAVPAVRSLGPHSKCHLRKTPPTYSSSTAMAAVIGNPKLPSAVMDRWLWGPMPS
AEEEAYMVSELLGCQPLVGSMATKERVTSALTQAECVHFATHVSWKLSALVLTPNTEGNP
ASSKSAFGHPYTIPESLRVQDDASDVESISDCPPLRELLLTAADLLDLRLSVKLVVLGSS
QEANSRVTADGLVALTRAFLAAGAQCVLVALWPVPVAASKMFVHAFYSSLLNGLKASASL
GEAMKAVQSSKAFSHPSNWAGFTLIGSDVKLNSPSSLIGQALTEILQHPERARDALRVLL
HLVEKSLQRIQNGQRNAMYTSQQSVENKVGGIPGWQALLTAVGFRLDPAASGLPAAVFFP
TSDPGDRLQQCSSTLQALLGLPNPALQALCKLITASETGEQLISRAVKNMVGMLHQVLVQ
LQACEKEQDFASAPIPVSLSVQLWRLPGCHEFLAALGFDLCEVGQEEVILKTGKQASRRT
THFALQSLLSLFDSTELPKRLSLDSSSSLESLASAQSVSNTLPLGYQHPPFSPTGADSIA
SDAISVYSLSSIASSMSFVSKPEGGLEGGGPRGRQDYDRSKSTHPQRATLPRRQMSPQAR
RGASKEEEEYEGFSIISMEPLATYQGEGKARFSPDPKQPCVKAPGGVRLSVNSKGSVSTP
NSPVKMTLIPSPNSPFQKVGKLASSDTGESDQSSTETDSTVKSQEDSTPKLDPQELAQRI
LEETKSHLLAVERLQRSGGPASPDREDGVVAPSSTTVFRASETSAFSKPILSHQRSQLSP
LTVKPQPPARSSSLPKVSSPVTSEVSGKDGLSPPGSSHPSPGRDTPVSPADPPLFRLKYP
SSPYSAHISKSPRNTSPACSAPSPALSYSSAGSARSSPADAPDEKVQAVHSLKMLWQSTP
QAPRGPRKLCRGAPGTLTSKRDVLSLLNLSPRHGKEEGGADRLELKELSVQPRDEAPPKV
PTNGHWCTDTATLTTPGGRSTTAATRPLRLPLANGYKFLSPGRLFPSSKC
NT seq
7353 nt
NT seq
+upstream
nt +downstream
nt
atggaacagccgccgcctctggcgcccgagccggcctcggcgcggagccgcaggcggcgg
gagccggagtctccgccggcgccgattcctctctttggtgctaagactattgtccagaga
agtcctgatgaaccagcactgagcaaagctgaatttgttgagaaagttcgtcagagtaac
caggcctgtcatgatggagacttccacacagctattgttttgtacaatgaagccctggca
gttgaccctcagaactgcattttgtatagcaacagatctgcagcctacatgaaaacccag
cagtaccacaaggcgctggatgatgcaatcaaagcccggctcctcaaccccaaatggcca
aaggcatacttccgacagggtgttgccctccagtaccttggacgtcacgcggacgccctg
gcagcctttgcgtctgggctggctcaagaccccaaaagtctccagctcctggtgggaatg
gtggaagctgccatgaagtctcccatgagagacaccctggagcccacttaccagcagctt
cagaaaatgaaactggacaagagtccctttgtggtcgtgtctgtggttgggcaggaactt
ctgacagccggacaccacggggcctccgtggttgtcttagaagctgctctgaagattggc
acttgcagcctcaagctgaggggctctgtgttctccgccctgagcagtgcacactggtct
cttgggaacacagagaagagcactgggtacatgcagcaagacctggacgtagccaagacc
ttaggtgaccagacaggagaatgccgagctcacgggaacctaggctctgcattcttttcc
aaggggaattaccgagaggccctcacaaaccacaggcatcagctggtgctcgccatgaag
ctcaaggaccgggaggcagcatcatcagccctgagcagcctgggtcacgtgtacacagcc
atcggagactatcccaacgctctggccagccacaaacagtgcgtccttctcgccaagcag
tccaaagatgacctttctgaagcccgagaactcggaaacatgggagccgtgtacatcgcc
atgggcgactttgagaatgccgtgcagtgtcatgaacaacacctgcggatagccaaggac
ctggggagcaagcgcgaggaggcccgggcctacagcaacctgggcagcgcctaccactac
cggaggaactttgataaggccatgtcctaccacaactgtgtgctggagctggcgcaggag
ctgatggagaagcccattgagatgcgagcctacgctggcttgggtcatgcagccaggtgc
atgcaggacctggagagggcaaaacagtaccacgagcagcagctgggtatcgcggaggac
ctcaaggaccgggcggcggaaggccgcgcatcctccaatctggggatcatccaccagatg
aaaggcgattacgacacagccctgaagctccacaagacccacctgtgcatcgcccaagag
ctgagcgactatgcagcccaaggccgcgcctacggaaatatgggcaatgcctacaacgcc
ctgggcatgtacgaccaggctgtcaagtaccaccgtcaagagctgcagatctccatggaa
gtaaacgaccgtgcctctcaggcatcgactcatgggaacctggctgtcgcctaccaggcc
ctgggagcccatgaccgggcgctgcagcactaccagaaccacttgaacatcgcccgggag
ctgagagacatccagagcgaggcccgggctctcagcaacctggggaacttccactgctcc
agaggagagtatgtccaggccgcaccctactacgaacagtacctccgcctagctcccgac
ctccaggacatggagggagaaggaaaggtctgccacaacctcggctatgcccactactgc
ctcgggaactaccaggaggccgtgaagtactatgagcaggatctggctctggccaaagac
cttcatgacaaactgagccaagcaaaagcctattgcaacttgggcctggccttcaaggct
ctgctgaacttcactaaagccgaggagtgtcagaagtaccttctgtccctagcccagtcc
ctggataattcccaggcaaagtttcgagccctagggaacctgggtgatatctttgtctgc
aagaaggatgtaaacggtgcgatcaaattctatgagcagcagctgggcctgtctcaccac
gtgaaagaccgaaggctggaggccagcgcctacgcggcgctgggtaccgcgtaccggatg
gttcagaagtacgacaaggccttgggttatcacacacaggagctggaggtctatcaggaa
ctgagcgacctgccgggggagtgccgggctcacgggcacctggcggctgtctacatggcc
cttggaaaatacacaatggcgttcaagtgctaccaggagcagctggagctggggcggaag
ctgaaggagccgagtctggaagcccaggtgtacggcaacatgggcatcacgaagatgaac
atgaacgtgatggaggacgccattggctactttgagcagcagctggccatgctgcagcag
ctcagcgggaacgagtctgtgctggacaggggtcgggcctacggcaacctgggggattgc
tacgaggccctgggggactacgaggaagccatcaagcactacgaacagtacctgtctgtc
gcccagagtctgaaccgcatgcaagaccaagccaaggcctaccggggtctaggaaacgga
cacagggcaacggggagcttgcagcaggcccttgtgtgcttcgagaagaggcttgtggtg
gcccatgagctcggcgaggcctccaataaagctcaggcctacggagagctgggaagtctc
cacagccagttagggaattacgaacaggccatctcctgcctcgaacgccagctgaacatt
gccagggacatgaaggaccgagccttggaaagtgacgcggcctgcggcctggggggcgtc
taccagcagatgggagagtatgacacggccctgcagtaccaccagctcgatctgcagatt
gcggaggagacagacaatcccacatgccagggccgagcctacgggaacctgggtctcacc
tatgagtccctgggcacttttgagagggctgtggtctatcaggagcagcacctgagcatc
gcggcacagatgaacgacttggtggccaagaccgtgtcctacagcagcctgggaaggact
caccacgccctgcagaactattctcaggcagtcatgtacttacaggaaggtttaaggcta
gctgagcaactgggtcgaagagaagatgaagcaaaaattcgccatggtcttggtctctcc
ctttgggcaagcggaaacttggaggaggctcagcaccagctttacagggcttcagcgttg
tttgaaacgatccggcacgaggcccagctgagcaccgactacaagctctccctgttcgac
ctgcaaacatcatcctaccaggccttgcagagggtgctcgtcagcctaggccaccatgat
gaagccctggcagtagcagaaaggggccggacgagagcatttgctgacctgctggtggaa
agacagaccggacaacaggactccgacccctactcgcccatcaccatcgatcagatctta
gagatggttaatgcccagcggggactagtgctgtactactctctggccgcaggctacctc
tacagctggctgcttgctcctggagcagggatcctgaagtttcacgaacattacttgggt
gataattcggtggaaagttccagtgatttccaagctggcagcagtgcaacgttgcccgta
gcaaccagctctacactggagcagcacatcgccagcgtccgagaggccctgggggtggag
tcttactactccagggcctgtgccagcagtgagacagaaagcgaagctggggacatcatg
gagcagcagttggaggagatgaacaagcagctcaactctgtaaccgaccccacaggcttc
ctgaggatggtgcgccacaacaacctcctgcacaggagctgccagagcatgacaagcttg
ttcagtggtacagtgtcacccagcaaggatgggacctcctctctgcccaggaggcagaac
tcactggccaagcccccactccgcgccctgtatgatctgctcatcgcgcctatggaaggg
ggcttgatgcactcaagcggccccgtgggccggcaccggcagctggtcctggttctggag
ggagagctctaccttgtcccctttgccctcctgaagggcagtgcctccaacgagtacctg
tatgaacgctttacgctcatcgctgtgcctgccgtccgctcgcttgggccgcactccaag
tgtcacttgaggaagaccccacccacgtattccagctccaccgccatggcagctgtcata
ggcaaccccaagctcccatcagcagtgatggacaggtggctatggggcccaatgccctca
gcagaagaggaggcatacatggtgtcagagcttctgggctgccagccccttgtgggtagt
atggccaccaaggagagggtcacgagtgccctgacccaggctgagtgtgtccactttgct
acccatgtctcttggaagctatcagccttagtcctcacccccaacacggagggcaaccct
gctagcagcaagagcgccttcggccacccctacaccatccccgagtcgctgcgggtgcag
gatgacgcaagtgacgtggaaagcatctcagactgcccaccgctgagggagctgctgctc
accgccgccgacctcctggacctgcggctgtctgtgaagctggtggtgctcggctcttcc
caggaggccaacagccgagtcacggcagacggcttggtggcgctgacacgggccttccta
gctgctggcgcacagtgtgtgctcgtggctctgtggccggtgccggtcgcagcttccaag
atgttcgttcatgccttctactcatccctgctgaatggcctgaaggccagtgcctccctg
ggggaggccatgaaggctgtgcagagcagcaaggccttctcacatccctccaactgggca
ggtttcacgcttataggaagtgatgtcaagctgaacagcccctcgtcactcatcggccaa
gcgctcacggagatcctgcagcacccggagcgggcacgggatgccctgcgtgtgctgctg
cacctggtggagaagtccctgcagcggatccagaatggacagcgcaacgccatgtacacg
tctcagcagagcgttgagaacaaagtgggtggcatccctggatggcaggctctcctcacc
gcagtgggcttccggctggaccctgctgccagtgggctgccggccgctgtcttctttcca
acctcagacccaggcgacaggttgcagcaatgcagcagcactctccaggccctgctgggt
ctgcccaacccggctctccaagcactgtgcaagctcatcacggcctcagagacgggggag
cagctcatcagccgggctgttaaaaatatggtgggaatgctccatcaggtgctggttcag
ctgcaggcctgcgagaaggaacaggactttgcctcggcccccattccagtctccctcagt
gtccagctgtggcggctcccagggtgtcatgaattcctggcagctctcgggtttgaccta
tgtgaagtgggccaagaggaagtgatcctgaaaaccggcaagcaggctagtcggcgcacc
acccactttgctctccagtccctgctgtctctcttcgattccaccgagctccccaagcgc
ctcagcctggacagctcgtcctccctggagtccctggcgtcggcacagtctgtgtccaac
actctgcccctgggctaccagcaccctcctttctcgcccactggggcagacagcattgcc
tccgatgccatctctgtctacagtctcagctccattgcttcctccatgagttttgtctcc
aagccagaggggggtttggaaggtgggggtccccgaggacgacaggactatgataggtcc
aagagcacccacccgcaacgagccaccctgccacggcgccagatgtccccccaggccaga
cgtggggccagcaaggaagaagaagaatacgaggggttctccatcatcagcatggagcct
ctggcaacctaccaaggcgaggggaaggcacgcttctccccagaccccaagcagccatgt
gtcaaggcaccaggtggggtgaggctttcggtcaactccaagggaagcgtcagcactccc
aactcccccgtaaagatgaccctgatccccagcccaaactcaccctttcagaaagtggga
aagctggcaagctcagacacaggtgagtcggaccagtccagcacagagaccgacagcact
gtgaagtcccaggaggacagcaccccaaagctggacccccaggagctggcccagaggatc
ctagaggagaccaaaagccacctcctggcagtagagcgccttcagaggagtggtggccca
gctagcccagaccgagaagatggcgtggtggcacccagcagcaccacggtcttcagggcc
tcagagaccagcgccttcagcaagcctatcctgtctcatcagaggagccagctgtcacca
ctcactgtcaaaccacagcccccagccaggagctcatcccttcccaaggtgagcagccct
gtcacatcagaggtgtcaggcaaggatggcctgagccctcctggcagcagccacccatca
cctggccgtgacaccccagtctccccggcagacccgccactcttcagactcaagtacccc
agctctccttacagcgctcacatttccaagtccccccggaacacgtcccctgcatgcagt
gcgccgtctcctgcactctcctactcttcagctggctctgctcgctccagtccagccgat
gcccccgatgagaaggtgcaggccgtgcacagcctcaagatgctctggcagagcacaccc
caggcccccaggggcccccggaaactatgtcgaggtgcaccgggaaccctgacatcaaaa
agagatgtcctcagcctgctgaacttgtccccacggcatggcaaggaggaaggtggggca
gacaggctggaactgaaggagctgtctgtgcagccacgtgacgaggcgccacccaaagtt
cccaccaatggccactggtgcacggatacagcaacactgacaacacccggcggccgcagc
acgacagctgccactcgccctctgagacttcccttggccaatggttacaagttcctatcc
ccaggaaggctcttcccttcctccaaatgttaa
DBGET
integrated database retrieval system
