Arvicanthis niloticus (African grass rat): 143437679
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Entry
143437679 CDS
T08817
Symbol
Lhx5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
143437679 (Lhx5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
anu03000
]
143437679 (Lhx5)
Transcription factors [BR:
anu03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
143437679 (Lhx5)
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Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Prok-RING_1
Orbi_VP3
Motif
Other DBs
NCBI-GeneID:
143437679
NCBI-ProteinID:
XP_076778737
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All DBs
Position
24:11159946..11169109
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSSSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQSDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHGADNPRFTDMISHPDTPSPEPGLPGA
LHPMPGEVFSGGPSPPFPMSGTSGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgtgagcggcccatcctcgaccgctttctgctgaacgtg
ctggaccgcgcgtggcatatcaaatgtgttcaatgctgcgagtgcaaaaccaacctctcg
gagaagtgtttctctcgggagggcaagctgtactgtaaaaacgacttcttcaggcgcttt
ggcactaagtgcgccggctgtgcgcaaggtatctctcccagcgacctggtccgtaaggcc
cggagcaaagtcttccacctcaactgtttcacctgcatggtgtgcaacaagcagctgtcc
accggggaggaactctacgtgatcgacgagaacaagtttgtgtgcaaggacgactactta
agctcttccagcctcaaggagggaagcctcaactcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggatccgttacaggacgaccccaaagagaccgacaactcgacc
tcatcggacaaggagactgcaaacaacgagaatgaggaacagaactccggcaccaaacgg
cgcggcccgcgcaccaccatcaaggccaagcagctggagacgctcaaggcggccttcgca
gccacgcccaagcccacgcgccacatccgcgaacagctggcccaggagacgggcctcaac
atgagggtcattcaggtgtggtttcagaaccgaaggtccaaagaacgtcgcatgaaacag
ctgagcgctctgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccc
ctgggcggccgcttggacgagtctgagatgttggggtctaccccatacacttattacgga
gactaccaaagcgactactacgctccgggaggcaactacgatttcttcgcgcacggtccg
ccgtcgcaggcgcagtccccggccgactccagcttcctggcagcatccggacctggctcg
acgccgctgggcgcgctggaaccgccgctggcagggcctcacggcgcggacaaccccagg
ttcaccgacatgatctcgcacccggacacgcctagccccgagccgggcctgcccggggcg
ctgcatcccatgccgggagaggtgttcagcggcgggcctagcccgcccttccctatgagt
ggcaccagcggctacagcggacccctgtcgcaccccaaccctgagctcaacgaagcggcc
gtatggtaa
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