Arvicanthis niloticus (African grass rat): 143437771
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Entry
143437771 CDS
T08817
Symbol
Vps33a
Name
(RefSeq) vacuolar protein sorting-associated protein 33A isoform X1
KO
K20182
vacuolar protein sorting-associated protein 33A
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04140
Autophagy - animal
anu04142
Lysosome biogenesis
anu04145
Phagocytosis
anu04148
Efferocytosis
anu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
143437771 (Vps33a)
04142 Lysosome biogenesis
143437771 (Vps33a)
04140 Autophagy - animal
143437771 (Vps33a)
04148 Efferocytosis
143437771 (Vps33a)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
143437771 (Vps33a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
143437771 (Vps33a)
Membrane trafficking [BR:
anu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
143437771 (Vps33a)
Hops complex
143437771 (Vps33a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
RMD9_mid
DTP-pb9_A-dom_C
Pectinesterase
Motif
Other DBs
NCBI-GeneID:
143437771
NCBI-ProteinID:
XP_076778944
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All DBs
Position
24:complement(14282837..14309996)
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AA seq
597 aa
AA seq
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MAAHLSYGRVNLNVLREAVRRELREFLDKCAGSKAIVWDEYLTGPFGLIAQYSLLKEHEV
EKMFTLKGSRLPAADVKNIIFLVRPRLELMDIIAENVLSEDRRGPTRDFHILFVPRRSLL
CEQRLKDLGVLGSFIHREEYSLDLIPFDGDLLSMESEGAFKECYLEGDQTSLYHAAKGLM
TLQALYGTIPQIFGKGECARQVANMMVRMKREFTGSQNSVFPVFDNLLLLDRNVDLLTPL
ASQLTYEGLIDEIYGIQNSYVKLPPEKFAPKKQGGGGGKDLPTEAKKLQLNSAEELYAEI
RDKNFNAVGSVLSKKAKIISAAFEERHNAKTVGEIKQFVSQLPHMQAARGSLANHTSIAE
LIKDVTTSEDFFDKLTVEQEFMSGIDTDKVNNYIEDCIAQKHPLIKVLRLVCLQSVCNSG
LKQKVLDYYKREILQTYGYEHILTLNNLEKAGLLKAQTGGRNNYPTIRKTLRLWMDDVNE
QNPTDISYVYSGYAPLSVRLAQLLSRPGWRSIEEVLRILPGPHFEERQPLPTGLQKKRQP
GENRVTLVFFLGGVTFAEIAALRFLSQLEDGGTEYVIATTKLMNGNSWIEALMEKPF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcacctgtcgtacgggcgagtgaacttgaacgtgctgcgcgaggcggtgcgt
cgggagctgcgcgagtttctggacaagtgcgctgggagcaaggcaatagtgtgggatgaa
tacttaacaggaccatttggactgatagcgcagtactcactgctaaaggaacatgaagtg
gaaaaaatgttcacacttaaaggaagtcgtttgccggcggctgatgtcaagaatatcatt
tttttggtcagacccaggctagaattgatggatataattgctgagaatgtactcagtgag
gacaggcgtggacctaccagggatttccatattttgtttgtgcctcgaaggagcctactg
tgtgagcaacggctgaaggacctgggtgttttgggatcctttatccatcgagaggagtac
agtttagatctcattccctttgatggggacctcttatccatggagtcagagggcgctttc
aaagagtgctacctggaaggcgaccagacaagcctgtaccacgcagccaaggggctgatg
actctacaagcgctgtatggaactatcccccagatcttcgggaaaggggaatgtgctcgg
caagtggccaatatgatggtcaggatgaagagggagttcacgggaagccaaaactcagtg
tttcccgtgtttgataacctcttgctgcttgatcgcaatgtggatctactgacaccgctt
gcctcccagctcacgtacgagggcctcatcgatgagatttacggcattcagaacagttat
gtgaagttacctccagagaaatttgcacccaagaagcagggcggcggcggcgggaaggac
cttcccacggaggcgaagaagcttcagctcaactccgcagaggaactctatgctgagatc
cgagacaagaacttcaacgctgtgggctctgtgctcagcaagaaagcgaagatcatctcc
gcggcctttgaggagcgacacaatgctaagacagtcggggagatcaaacagtttgtgtcc
caactaccccacatgcaggcagccaggggatcgcttgccaaccacacctcaattgcagag
ttaatcaaagacgtcaccacttctgaagatttctttgataagttgacagtggagcaggag
ttcatgtccgggatagacactgataaggtcaacaattacatcgaggactgtattgcccaa
aagcatccactcatcaaggtgctgaggttggtttgcctgcagtccgtgtgcaacagtggg
ctcaagcagaaggttctggactactacaaacgggagattctccagacctacggctatgag
cacatcctgacgttgaacaacctggagaaggccggcctgctaaaggcgcagacagggggc
aggaacaattacccaacaattcggaagacgttacgcctctggatggatgatgtcaatgaa
caaaaccccacagacatatcctacgtgtacagtggttacgctccgctcagtgtgcgactc
gctcagctcctttcccggccgggctggcggagcatcgaggaagttctccgcattctccca
gggccccactttgaggaaaggcagccactgcccaccgggctgcagaagaaacgccagcca
ggagaaaacagagtcacactggtctttttcctcggcggtgtcacctttgctgaaatagcc
gccctgcgctttctctcccagctggaagatggaggcacagagtatgtaattgcaaccact
aaactgatgaatggaaacagctggatagaagctctcatggaaaaacctttctag
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