Arvicanthis niloticus (African grass rat): 143437853
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Entry
143437853 CDS
T08817
Symbol
Rabgef1
Name
(RefSeq) rab5 GDP/GTP exchange factor isoform X1
KO
K20131
Rab5 GDP/GTP exchange factor
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
143437853 (Rabgef1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
anu04131
]
143437853 (Rabgef1)
Membrane trafficking [BR:
anu04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
143437853 (Rabgef1)
Protein recycling
Other Rab GTPase associated proteins
143437853 (Rabgef1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VPS9
DUF5601
zf-A20
CID_GANP
SSTK-IP
Motif
Other DBs
NCBI-GeneID:
143437853
NCBI-ProteinID:
XP_076779158
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All DBs
Position
24:20560267..20602476
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AA seq
492 aa
AA seq
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MSLKSERRGIHVDQSELLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWELAER
LQREEEEAFASSQSSQGAQSLTFSKFEEKKTNEKTRKVTTVKKFFSASSRAGSKKAEIQE
AKAPSPSINRQTSIETDRVTKEFIDFLKTFHKTGQEVYKQTKMFLEAMPYKRDLSIEEQS
ECTQDFYQNVAERLQTRGKVPPEKVEKIMDQIEKHIMTRLYKFVFCPETTDDEKKDLAIQ
KRIRALHWVTPQMLCVPVNEEIPEVSDMVVKAITDIIEMDSKRVPRDKLACITRCSKHIF
NAIKITKNEPASADDFLPTLIYIVLKGNPPRLQSNIQYITRFCNPSRLMTGEDGYYFTNL
CCAVAFIEKLDAQSLNLSQEDFDRYMSGQTSPRKQESESWSPEACLGVKQMYKNLDLLSQ
LNERQERIMSEAKKLEKDLIDWTDGIAKEVQDIVEKYPLEIKPPTQPLAAIDSENVENDK
LPPPLQPQVYAG
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgaagtccgaacgcaggggaattcatgtggatcaatctgagctcctgtgcaag
aaaggatgcggttactacggcaaccctgcctggcagggtttctgctccaagtgctggagg
gaagagtaccacaaggcccgacagaagcagatccaagaggactgggaactggcagaacga
cttcaacgggaggaggaagaggccttcgctagcagccagagcagccaaggtgctcagtcc
ctcaccttctccaagtttgaggagaagaaaaccaacgagaaaacccgcaaggtcaccaca
gtgaagaaattcttcagcgcctcttccagggctggatccaagaaggcagaaattcaggaa
gccaaagctcccagtccctccataaaccggcagaccagcattgagacggaccgagtgact
aaggagttcatagactttctcaagaccttccacaagacaggccaagaagtctataaacag
acgaagatgtttttggaagcaatgccttataaaagggatttaagcatcgaggaacagtca
gagtgtactcaggacttttaccagaatgtggctgaaagattgcagacccgtgggaaagtg
cctccagagaaagtggagaagataatggatcagattgaaaagcacatcatgacccgtctc
tataaatttgtgttctgcccagagactaccgatgatgagaagaaagatctcgccattcaa
aagaggatcagggctctgcactgggtgacacctcagatgctctgtgtccctgtcaatgag
gaaatccctgaagtgtccgacatggtggtgaaagcaatcacagacatcattgagatggac
tcaaagcgtgtgcctcgggacaagctggcctgcatcaccaggtgcagcaagcacatcttc
aatgccatcaagatcaccaagaatgagccagcctctgccgatgacttcctgcccaccctt
atctacatcgtcctgaagggcaacccccctcgactgcagtccaacatccagtatatcact
cgcttctgcaaccccagccggctcatgacgggcgaggatggctactacttcaccaacctg
tgctgtgccgtggctttcattgagaaattagacgcccagtctttgaatttaagtcaggag
gattttgaccggtacatgtctggccagacgtcccccaggaagcaagagtctgagagctgg
tccccagaggcctgcttaggtgtgaagcaaatgtataagaacttggacctcctgtctcag
ttgaatgaacggcaggaaaggatcatgagcgaagccaagaaacttgaaaaagacttaata
gactggacagacgggattgccaaggaagttcaagacattgttgagaaatacccacttgag
attaagcccccgacccaacccttagcagccatcgactctgagaatgtggagaacgacaag
ctccctcccccactgcagcctcaggtgtacgcagggtga
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