Arvicanthis niloticus (African grass rat): 143437923
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Entry
143437923 CDS
T08817
Symbol
Polr2j
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB11-a isoform X1
KO
K03008
DNA-directed RNA polymerase II subunit RPB11
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03020
RNA polymerase
anu03420
Nucleotide excision repair
anu05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
143437923 (Polr2j)
09124 Replication and repair
03420 Nucleotide excision repair
143437923 (Polr2j)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
143437923 (Polr2j)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
anu03021
]
143437923 (Polr2j)
03400 DNA repair and recombination proteins [BR:
anu03400
]
143437923 (Polr2j)
Transcription machinery [BR:
anu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
143437923 (Polr2j)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
143437923 (Polr2j)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_L_2
RNA_pol_L
SHNi-TPR
Motif
Other DBs
NCBI-GeneID:
143437923
NCBI-ProteinID:
XP_076779341
LinkDB
All DBs
Position
24:26385412..26391104
Genome browser
AA seq
117 aa
AA seq
DB search
MNAPPAFESFLLFEGEKKITINKDTKVPNACLFTINKEDHTLGNIIKSQLLKDPQVLFAG
YKVPHPLEHKIIIRVQTTPDYSPQEAFTNAITDLISELSLLEERFRVAIKDKQEGIE
NT seq
354 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcccctccagctttcgagtcgttcttgctcttcgaaggcgagaagaaaatcacc
attaacaaggacaccaaggtgcccaacgcctgcttgttcaccatcaacaaagaagaccac
actctggggaacatcattaaatcccagctgttgaaggacccacaggtgctgtttgctggc
tacaaagtcccgcaccccttggagcacaagatcatcatccgtgtgcagaccaccccagac
tacagtccccaggaggctttcaccaacgccatcacagacctcatcagcgagctctccctt
ctagaggagcgattccgggtggccatcaaggacaagcaagaaggaattgagtag
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