Arvicanthis niloticus (African grass rat): 143438081
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Entry
143438081 CDS
T08817
Symbol
Usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
anu
Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
anu01002
]
143438081 (Usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
anu04121
]
143438081 (Usp42)
Enzymes [BR:
anu01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
143438081 (Usp42)
Peptidases and inhibitors [BR:
anu01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
143438081 (Usp42)
Ubiquitin system [BR:
anu04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
143438081 (Usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
143438081
NCBI-ProteinID:
XP_076779721
LinkDB
All DBs
Position
24:complement(34468043..34507394)
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AA seq
1329 aa
AA seq
DB search
MTIVDKTEPSDPSTCQNQPGSSEAVSPEDMDTGSASWGAVSSISDVSNHTLSLGPVPGAV
VYSNSSVPEKSKPSPPKDQVLGDGIAPPQKVLFPSEKICLKWQQSHRVGAGLQNLGNTCF
ANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTHITQALSNPGDVIKPMFVIN
EMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLNGSNKLDRHTQATTLVCQIFGGYLRSR
VKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKCKKMVPAS
KRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLV
HTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFYIRSHDVKNGGEP
THPTHSPGQSSPRPGISQRVVNNKQAAPGFIGPQLPSHVMKNTPHLNGTTPVKDTPSSSV
SSPNGNTSVNRASPATASTSVQNWSVNRPSVIPEHPKKQKITISIHNKLPVRQGQAQLNN
NLHGTCLEAPSKAAPSSTITNPSAIQSTSNVPTTPVSNKVAKSVSPSESCPKPMVNGKAK
VGSSVLVPYGAESSEESDEESKGLAKENGVDMMASAHSDRPEAAADEDAQASPHELQESV
LLNGANSADSDSPERSLASDSASCQGQPDLHTENLFSKLNGLPGKVMPAPLQSVPEDRIL
ETFKLTNQTKGPAGEESWTTTGGSSPKDPVSQPEPISDETSPLEIPEAVTNGSVTTASTP
SPLEPTISCTKEDSSVVVSAEPVEDLPSIPALCNSTGTTLGDAPVPESCDPGDLTANSSQ
PTQAVKDDTAETSQDSASAEVVERLSPAPSGLTGDGCEQKLFLYLSTEGSEEAEDSSRSS
AVSADTMPPQPDRTTTSSCEGAAEQAVGDRGDGGSVGPKAQEPSPAKEKMSILRKVDRGH
YRSRRDRSSSGEHVRDSRPRPEDHHHKKRRCSSRERPKQERHPANTNCNGAQHLGHGDRA
SPERRSLSRYSHHHSRIRSGLEQDWSRCHHLENEHAWVRERFYPDKMRWDKCRYYYDRYT
GLYEAREWRPLHGREHERLVQSGRPHKDSYWGRKGWELQSRSKERPHFHSPREAPSLALP
LERHLQEKAAVSVQKSSHSLPERFHEHQSVKSRKRRYETLESNNGRLEKKVHKSLEKDAL
EEPRVKKHKKSKKKKKSKDKHRDRDSRHQQESDFSGAYSDADLHRHRKKKKKKKRHSRKS
EDFIKDVEMHLPKLSSYEAVGHFRRTEDTFLLADGRPVEDSGPFREKTKHLRMESRPDRC
HLSEYGQGD
NT seq
3990 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaactgaaccttcagacccatccacctgtcagaaccagcctggc
agttctgaggccgtctcacctgaagacatggacacaggctctgccagctggggtgccgtg
tcttcaataagtgatgtctcaaatcatacactttcattagggccggtgcctggtgctgta
gtttattctaattcgtctgtacctgaaaaatcaaaaccatcaccaccaaaggatcaagtc
ctaggtgatggcattgctcctcctcaaaaggtcctatttccatctgaaaagatttgtctt
aagtggcaacaaagtcatcgggttggcgctgggctccagaatttgggcaatacctgtttt
gccaatgctgcattgcagtgtctgacttatacaccacccctcgccaattacatgttatcc
catgaacactccaagacatgccacgccgaaggattttgtatgatgtgcacgatgcagaca
cacattacccaggcacttagcaaccctggggacgttatcaagccgatgtttgtcatcaat
gaaatgcggcgtatagctagacacttccgttttggaaaccaagaagatgcccatgaattt
cttcagtacacggttgatgccatgcagaaagcgtgtttaaatggcagcaataaattagac
agacacacccaggccaccaccctggtctgccagatatttggaggctacctaagatcccga
gttaaatgtttaaattgcaaaggtgtttcggataccttcgatccatacctggacataaca
ttggagattaaggctgcacagagtgttaccaaggcgttagagcagtttgtgaagccggaa
caactggatggagaaaactcctacaaatgtagcaagtgcaaaaaaatggttccagcttca
aagagattcaccatccataggtcctctaatgttcttaccatttcactgaagcgttttgcc
aactttaccggtggaaaaattgctaaggatgtgaaatatccggagtaccttgatattcgg
ccctatatgtctcagcccaatggagaaccaattatttatgttttgtatgctgtgctggtg
cacactggttttaactgtcatgctggccactacttctgctacatcaaggctagcaatggc
ctctggtatcagatgaatgactccatcgtgtccaccagtgatatcagatcggtgcttaac
cagcaagcttacgtgctcttttacatcaggtcccatgatgtgaaaaatggaggggaaccc
actcatcctacccatagccccggccagtcttctccccgcccaggaatcagtcagcgggta
gtcaacaacaagcaggcggcaccggggttcattgggccccagctgccttcccatgtgatg
aagaacacaccacacttgaatggcaccacgccggtgaaagacacaccaagtagttctgtg
tcaagccctaatggaaacaccagcgtcaatagggccagtcctgctactgcttcaacttct
gtgcagaactggtctgttaacaggccctcagttattccagaacaccccaagaaacaaaaa
attaccatcagtattcacaacaagttgcctgttcgccaaggtcaggcacagctaaataac
aacctccatggcacttgtctggaggcccctagcaaggcagcaccctcttccaccatcact
aacccttctgcaatacagtctacctcgaacgtacccaccacaccagtttctaataaagta
gcaaaatcagtttcccccagtgagtcctgtcccaagcccatggtgaacggcaaggctaag
gtgggctccagtgtgctcgtcccctatggggccgagtcctcagaagagtctgatgaggag
tcgaaggggctggccaaggagaacggtgtggacatgatggccagcgctcactcggacagg
ccggaagctgctgcagatgaggatgctcaggcttcccctcacgagcttcaagagtcagtc
ctgctaaacggtgctaatagtgcagacagtgactcgccagagagaagcctggcatcggac
agtgccagctgccagggccagcccgatctacacacagaaaacctcttttccaaacttaat
ggtcttcctggaaaggtgatgcctgctcctttgcagtctgttcctgaagacagaatcctt
gagaccttcaagcttaccaaccagacaaagggtccagcgggggaagagagttggactacg
acagggggaagctctccaaaggaccctgtttcacaaccagagcccatcagtgatgagacc
agtccccttgagataccggaggcagtcaccaatgggagcgtaacgaccgcttccaccccg
tcacccctggagcctaccatcagctgtaccaaagaagactcatctgttgttgtctcagcc
gaacctgtggaggatttgccttccatccctgctctttgtaacagcaccggtactaccttg
ggggatgccccagtgcccgaatcgtgtgaccctggagacttgactgccaactcgagccag
ccaacccaagcggtgaaagacgatacagctgagacctctcaggactctgcctcggctgaa
gtggtggagaggctgagccctgctccctcaggactcacaggtgatgggtgtgagcagaaa
ctcttcctttacctcagcacagaggggtcagaggaggcagaagactcttccagaagctcg
gcggtctctgctgacacaatgcctcctcagcctgacaggaccaccaccagttcctgtgaa
ggggctgccgagcaggctgttggggaccgaggggatggaggcagtgtgggacctaaagct
caggagccttccccagccaaggagaagatgagcatccttcggaaagtggaccgaggacat
tatcgaagccggagagaccggtcctctagtggggagcacgtgagggacagcaggccccgg
ccagaggaccatcaccataagaagaggcgctgttccagccgagagcggcccaagcaggaa
cgccaccctgctaatacaaactgcaatggggcccagcacctgggccacggtgacagagcc
agccctgagcgccgctccctgagcaggtacagccaccatcattcacggattaggagtggc
ctggagcaggactggagccggtgccaccatttagaaaacgagcatgcctgggtcagggag
agattctacccagacaagatgcggtgggacaagtgcaggtattactatgacaggtacacg
ggcctgtacgaggcccgtgagtggcggcctctgcatggtcgtgagcatgaacgccttgtc
cagtctggacggccacacaaggacagctactggggccgcaagggctgggagttgcaatcc
cggagcaaggaacggcctcacttccacagcccccgagaggcccctagccttgctctgccc
ctcgagaggcatctccaagagaaggctgccgtcagtgtgcagaagagcagccacagtctc
ccggagcgctttcatgaacaccaaagtgtcaagtcgcggaaacggaggtatgagactcta
gaaagtaataatggccgtctagaaaagaaagtccacaaaagcctggagaaggacgcgcta
gaagagccccgcgtgaagaagcacaaaaagtctaaaaagaaaaagaagtccaaagataaa
catcgggatagagacagcaggcaccagcaagaatccgacttttcaggagcatactctgat
gctgatctccatagacaccggaagaaaaagaagaaaaagaaaaggcattcaaggaagtcg
gaggactttataaaagatgttgagatgcatttaccgaagctctcaagctatgaggccgtt
ggccatttccggagaacagaggatacctttctactggctgatggtcggcctgtggaagac
agtggccctttccgagagaaaacgaagcatttaaggatggaaagccggcctgacagatgc
catctgtcagagtatggccagggtgactaa
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integrated database retrieval system
