Arvicanthis niloticus (African grass rat): 143438178
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Entry
143438178 CDS
T08817
Symbol
Rfc3
Name
(RefSeq) replication factor C subunit 3 isoform X1
KO
K10756
replication factor C subunit 3/5
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu03030
DNA replication
anu03410
Base excision repair
anu03420
Nucleotide excision repair
anu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
143438178 (Rfc3)
03410 Base excision repair
143438178 (Rfc3)
03420 Nucleotide excision repair
143438178 (Rfc3)
03430 Mismatch repair
143438178 (Rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
anu03032
]
143438178 (Rfc3)
03036 Chromosome and associated proteins [BR:
anu03036
]
143438178 (Rfc3)
03400 DNA repair and recombination proteins [BR:
anu03400
]
143438178 (Rfc3)
DNA replication proteins [BR:
anu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
143438178 (Rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
143438178 (Rfc3)
Chromosome and associated proteins [BR:
anu03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
143438178 (Rfc3)
DNA repair and recombination proteins [BR:
anu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
143438178 (Rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
143438178 (Rfc3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA
AAA_lid_RFC1
AAA_22
Sigma54_activ_2
ABC_tran
AAA_16
AAA_2
nSTAND6
AAA_11
MTC2_N
Motif
Other DBs
NCBI-GeneID:
143438178
NCBI-ProteinID:
XP_076779936
LinkDB
All DBs
Position
24:complement(38904000..38913805)
Genome browser
AA seq
356 aa
AA seq
DB search
MSLWVDKYRPSSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQSITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AVRVPAPSIEDICSVLSTVCKKEGLALPSKLAHRLAEKSGRNLRKALLMCEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEIIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMMF
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgagcctctgggtggacaaataccggccgagctcccttgcccggctggactatcacaag
gaacaggcagcacagctgcgcaacctggtgcagtgtggagactttcctcacctcttagta
tatggcccatcaggtgctggaaagaagacaagaattatgtgtattctacgtgaactttat
ggtgttggggtggagaagctgagaattgagcatcagagtatcacaactccatctaaaaaa
aaaattgaaatcagcaccattgcaagtaactaccaccttgaagttaatcccagtgatgct
gggaacagcgaccgggttgtaattcaggagatgctgaagacagtggcacagtcacaacag
ctggaaaccagctcacaaagagacttcaaagtggtattattgacagaggtggacaaactc
acaaaggatgctcagcacgccttgcgtaggaccatggagaagtacatgtctacctgcagg
ctgatcttgtgctgcaattccacgtctaaagtgatacccccaatccgaagcaggtgcctg
gcagttcgtgtgcctgctcccagcatcgaagatatttgcagtgtactatccacagtctgc
aagaaggaaggtctggctcttccttcgaaattggctcataggctggccgagaagtctggc
aggaacctcaggaaagccttacttatgtgtgaagcctgcagagtgcagcaataccctttt
actgaagaccaagaaatcccggagacagactgggaggtgtatctgagggagactgcaaat
gctattgtcagtcagcagacgccacagaggctccttgaagtccgtggaaggctctatgag
cttctaactcattgtattcctcctgagataataatgaagggcctactctcagaactccta
cataactgtgatgggcagctgaaaggggaagtggcacagatggcagcctattatgagcat
cgactacagctgggcagcaaagccatttatcatttggaagcatttgttgcaaagtttatg
gcactttataagaagttcatggaggacggactggaaggcatgatgttctaa
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