KEGG   Arvicanthis niloticus (African grass rat): 143439123
Entry
143439123         CDS       T08817                                 
Symbol
Dscaml1
Name
(RefSeq) cell adhesion molecule DSCAML1 isoform X1
  KO
K06768  Down syndrome cell adhesion molecule-like protein 1
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:anu04515]
    143439123 (Dscaml1)
Cell adhesion molecules [BR:anu04515]
 Immunoglobulin superfamily
  Other
   143439123 (Dscaml1)
SSDB
Motif
Pfam: I-set Ig_3 fn3 Ig_2 ig FN3_DSCAM-DSCAML_C V-set Ig_VEGFR-1-like_5th VEGFR1-3_N_Ig-like C2-set_2 Pur_ac_phosph_N C1-set Fn3_ROS1 Ig_6 Receptor_2B4 V-set_CD47 Interfer-bind Ig_RIMBP2 fn3_2 Fn3_VIN3 Fn3_Dep-1_3rd ChitinaseA_N SseB
Other DBs
NCBI-GeneID: 143439123
NCBI-ProteinID: XP_076781097
LinkDB
Position
26:13733620..14055142
AA seq 2053 aa
MWLVTFLLLLDSLHKARPEDVGTSLYFVNDSLQHVTFSSSVGVVVPCPAAGSPSAALRWY
LATGDDIYDVPHIRHVHANGTLQLYPFSPSAFNSFIHDNDYFCTAENAAGKIRSPNIRIK
AVFREPYTVRVEDQRSMRGNVAVFKCLIPSSVQEYVSVVSWEKDTVSITPENRFFITSHG
GLYISDVQKEDALSTYRCITQHKYSGETRQSNGARLSVTDPAESIPTILDGFHSQEVWTG
HAVELPCAASGYPIPAIRWLKDGRPLPTDSRWAKRITGLTISDLRTEDSGTYICEVTNTF
GSAEANGVLTVIDPLHVTLTPKKLKTGIGSTVILSCALTGSPEFTIRWYRNTELVLPGEA
ISIRGLSNETLLISSAQKSHSGAYQCFATRKAQTAQDFAIIVLEDGTPRIVSSFSEKVVN
PGEQFSLMCAAKGAPPPTVTWALDDEPVVRDGSHRTNQYTMSDGTTISHMNVTGPQIRDG
GVYRCTARNSVGSAEYQARINVRGPPSIRAMRNITAVAGRDTLINCRVIGYPYYSIKWYK
DALLLPDNHRQVVFENGTLKLTDVQKGMDEGEYLCSVLIQPQLSISQSVHVAVKVPPLIQ
PFEFPPASIGQLLYIPCVVSSGDMPIRITWRKDGQVIISGSGVTIESKEFMSSLQISSVS
LKHNGNYTCIASNAAATVSRERQLIVRVPPRFVVQPNNQDGIYGKAGVLNCSVDGYPPPK
VMWKHAKGSGNPQQYHPVPLTGRIQILPNSSLLIRHVLEEDIGYYLCQASNGVGTDISKA
MFLTVKIPAMITSHPNTTIAIKGHAKELNCTARGERPIIIRWEKGDTVIDPDRVMRYAIA
TKDNGDEVVSTLKLKPADRGDSVFFSCHAINSYGEDRGLIQLTVQEPPDPPELEIREVKA
RSMNLRWTQRFDGNSIITGFDIEYKNKSDSWDFKQSTRNISPTINQANIVDLHPASVYSI
RMYSFNKIGRSEPSKELTISTEEAAPDGPPMDVTLQPVTSQSIQVTWKAPKKELQNGVIR
GYQIGYRENSPGSNGQYSIVEMKATGDSEVYTLDNLKKFAQYGVVVQAFNRAGTGPSSSE
INATTLEDVPSQPPENVRALSITSDVAVISWSEPPRSTLNGVLKGYRVIFWSLYVDGEWG
EMQNVTTTRERVELRGMEKFTNYSVQVLAYTQAGDGVRSSVLYIQTKEDVPGPPAGIKAV
PSSASSVVVSWLPPTKPNGVIRKYTIFCSSPGSGQPAPSEYETSPEQLFYRIAHLNRGQQ
YLLWVAAVTSAGRGNSSEKVTIEPAGKAPAKIISFGGTVTTPWMKDVRLPCNSVGDPAPA
VKWTKDSEDSAIPVSLDGHRLIHTNGTLLLRAVKAEDSGYYTCTATNTGGFDTIIVNLLV
QVPPDQPRLTVSKTSASSITLTWIPGDNGGSSIRGFVLQYSVDNSEEWKDVFISSSERSF
KLDSLKCGTWYKVKLAAKNSVGSGRISEIIEAKTHGREPSFSKDQHLFTHINSTHARLNL
QGWNNGGCPITAIVLEYRPKGTWAWQGVRANSSTEVFLTELREATWYELRMRACNSAGCG
NETAQFATLDYDGSTIPPIKSAQGEGDDVKKLFTIGCPVILATLGVALLFVVRKKRKEKR
LKRLRDAKSLAEMLISKNNRSFDTPVKGPPQGPRLHIDIPRVQLLIEDKEGIKQLGDDKA
TIPVTDAEFSQAVNPQSFCTGVSLHHPALIQSTGPLIDMSDIRPGTNPVSRKNVKSAHST
RNRYSSQWTLTKCQASTPARTLTSDWRTVGSQHGVTVTESDSYSASLSQDTDKGRNSMVS
TESASSTYEELARAYEHAKLEEQLQHAKFEITECFISDSSSDQMTTGTNENADSMTSMST
PSEPGICRFTASPPKPQDADRGKNVAVPIPHRANKSDYCNLPLYTKSEAFFRKADGREPC
PVVPPREASMRNLTRAYHTQARHLTLDPASKPLGLPHPGATAATATATLPQRTLAMPAPP
AGTAPPAPGPTPSEPSAPPSAAPPAPSTEPPRAGGPHTKMGGSRDSLLEMSTPGVGRSQK
QGAGTYSKSYTLV
NT seq 6162 nt   +upstreamnt  +downstreamnt
atgtggctggtaactttcctcctgctcctggactctttacacaaagcccgccccgaggat
gtcggcaccagcctctactttgtaaatgactccctgcagcacgtaaccttctccagctct
gtgggtgtggtggtgccctgcccggccgctggatcccccagtgcggctcttcgatggtac
ctggccacgggcgacgatatctacgatgtgccacacatccggcacgtccatgccaacggg
actctgcagctctaccctttctccccctctgccttcaatagctttattcacgacaatgac
tacttctgcaccgcagagaacgcagccggcaaaatccggagccctaacattcgcatcaaa
gcagttttcagggaaccctacaccgtccgggtggaggatcaaaggtccatgcgtggcaac
gtggctgtctttaagtgcctcatcccctcttcagtgcaggaatacgttagtgtcgtgtct
tgggagaaagacacagtctccatcactccagaaaacaggtttttcatcacatcacacggt
gggctgtacatctcggacgtgcagaaggaagatgctctctccacctaccgctgcatcact
cagcacaaatacagtggggagactcgtcagagcaacggggctcgtctctctgtgacagac
cctgcagagtccatccccaccatcctggatggcttccactcccaggaagtgtggacgggc
cacgcagtagaactgccctgtgctgcctctggataccccatccctgccatccgctggctc
aaagatggcagacccctccctactgacagccgctgggctaagcgcattacagggctgacc
atcagtgacctgcgcactgaggacagcggcacctacatctgtgaggtcaccaacaccttc
ggatcagcagaggccaacggcgtcctcacggtcatcgaccctcttcatgtgaccctgaca
ccaaagaagctgaagacgggcatcgggagcacagtcatcctgtcctgtgcccttacgggc
tcacccgagttcaccatccgctggtaccgcaacacagaactggtcctgccgggtgaggcc
atctccatccgcgggctgagcaatgaaactctgctcatctcctcggcacagaagagccac
tcgggagcctaccagtgcttcgccactcgcaaggcccagacagcccaggactttgccatc
attgtgctggaagacggcacgccccgcatcgtctcatccttcagcgagaaggtggtcaac
cctggggagcagttctcactgatgtgtgccgccaagggcgccccgccccccacggtcacc
tgggccctggacgacgagcccgtcgtgcgggacggaagccaccgcaccaaccagtacacc
atgtccgacggcaccaccatcagccacatgaacgtcacgggtccccagatccgggatggg
ggcgtgtaccggtgcacagcgcggaactcggtgggcagtgctgaatatcaggcgcgaata
aacgtaagaggaccccccagcatccgggcaatgaggaacatcacggcagtcgcagggcgg
gacacactcatcaactgcagggtcattggctacccctactactccatcaagtggtacaag
gatgccctgctgctaccggataaccaccgccaggtggtgtttgagaacgggactctcaag
ctgacggatgtgcagaagggcatggatgagggagagtacctgtgcagtgttctcatccag
ccccagctttccatcagccagagcgtccacgtggctgtcaaagtgccccctctgatccag
cccttcgagttcccccctgcctccatcggccagctgctctatatcccctgtgtggtgtcg
tcgggggacatgcccatccgcatcacctggagaaaggacggacaggtgatcatctcaggc
tcaggcgtgaccattgagagcaaggaattcatgagctccctgcagatctccagcgtctcc
ctcaagcacaatggcaactacacctgcattgccagcaacgcagcggccaccgtgagcagg
gagcgccagctcatcgtgcgtgtgccccctcgatttgtggtgcagcccaacaaccaggat
ggcatctacggcaaagctggtgtgctcaactgctcggtagatggctacccgccacccaag
gtcatgtggaagcatgccaaagggagtgggaacccccagcaatatcacccagtgcccctc
actggccgcatccagatcctgcccaacagctccctgctgatacgccacgtcctggaagag
gacatcggctactacctctgccaggccagcaacggcgtgggcaccgacatcagcaaggcc
atgttcctcaccgtgaaaatcccagctatgatcacatcccaccccaacaccacaattgcc
atcaagggccacgccaaggagctgaactgcactgcacgtggcgagcggcccatcataatc
cgctgggagaagggggacacagtcattgatcccgaccgtgtcatgcgctatgccatcgct
accaaggataatggcgatgaggtggtctccacgcttaagctcaagccagctgaccgtggg
gactccgtgttcttcagctgccatgctatcaactcatatggagaggaccggggtttgatc
cagctcactgtgcaagaaccccctgaccccccagaactggagatcagggaagtgaaggcc
aggagcatgaacctacgctggactcagagatttgatggaaacagcatcatcactggcttt
gatattgaatataagaataaatcagactcctgggattttaagcagtccacacgcaacatc
tccccaaccatcaaccaggcgaacatcgtggacttacacccagcatccgtgtacagcatc
cgcatgtactccttcaacaagattggacgcagcgagccgagcaaggagcttaccatcagt
acagaagaggctgctcccgatgggcctcccatggatgtcaccttgcagccagtgacttca
cagagcatccaggtgacctggaaggcaccaaagaaggagctgcagaatggagtcatccgg
ggataccagattggctacagagagaacagccccggcagcaatgggcagtacagtattgtg
gaaatgaaagcgacgggggacagtgaagtctacaccctggataacctcaagaagttcgct
cagtatggcgtggtggtccaagccttcaaccgggctggcacagggccctcatccagtgag
atcaatgccaccaccttggaggatgtgcccagccaacccccagagaatgtccgagctctg
tccatcacttctgacgtggctgtcatctcctggtcagagcccccacgaagcaccctcaac
ggtgtcctcaaaggctaccgagtcatcttctggtcactctatgttgatggagagtggggt
gagatgcagaatgtcaccaccacaagggagcgagtggagcttcggggtatggagaagttc
accaactacagcgtccaggtgctcgcctacacacaggctggggatggtgtgcgcagcagt
gtgctctatatccagaccaaggaagatgttccaggcccccctgctggcatcaaagctgtc
ccttcatcggctagtagtgtggtcgtgtcctggctgcccccaaccaagcccaatggggtg
attcgaaaatataccatcttctgttccagccctgggtctggccagccggctcccagcgag
tatgagaccagtcctgaacagctcttctacaggatcgcccacctgaaccggggacagcag
tacttgctatgggtggctgcggtcacctctgcaggcagggggaacagcagcgagaaggtc
accattgagcctgctggcaaggccccagcaaagatcatctcattcggaggcactgtaacc
acaccctggatgaaagatgtccggctgccttgcaattcagtgggggatcctgccccggct
gtgaagtggaccaaggacagtgaagactcagcaatccccgtgtccttggatggacaccgg
ctcatccacacaaatggtacactgctgcttcgtgctgtgaaagcggaagactccggctat
tacacctgcacggccaccaacaccggtggctttgacaccatcatcgtcaaccttctggta
caagttcccccggaccagccccgcctcactgtctccaaaacctctgcctcttctatcacc
ctgacctggattccaggggacaatgggggcagctccatcagaggcttcgtgctgcagtac
tccgtggataacagcgaggagtggaaggatgtgttcatcagctccagcgagcgctccttc
aagctagacagcctcaagtgtggcacgtggtacaaggtgaagctggcagccaagaacagt
gtgggctctgggcgcatcagcgagatcatcgaggccaagacccatgggcgggaaccttcc
ttcagcaaagatcaacacctcttcacccacatcaactccacacatgctcggcttaacctg
cagggctggaacaatgggggctgccccatcacagccattgtcctggagtaccggcccaag
gggacctgggcctggcagggcgtccgagccaacagctccaccgaggtgtttctgacagaa
cttcgagaggctacgtggtatgagctccgcatgagggcttgcaacagtgccggctgtggc
aacgagaccgcccagtttgccaccctggactacgatggcagcaccatcccacccatcaag
tctgctcaaggagaaggcgatgatgtgaagaagctgttcaccatcggctgtccagtcatc
ctggccacccttggggtagctctgctctttgttgtacgaaagaagaggaaggagaaacgg
ctgaagaggctccgagatgcaaagagtttggccgaaatgctgataagcaagaacaacaga
agctttgacactcccgtgaaagggccaccccagggcccacggctccacatcgacatcccg
agggtccagctgctcattgaagacaaggaaggcatcaagcagctgggagatgacaaggcc
accatccctgtgactgatgctgagttcagccaagctgtcaacccgcagagcttctgtact
ggtgtttctttgcatcatccagccctcatccagagcacaggacccctcatcgacatgtca
gacatccgaccaggaaccaatccagtgtccaggaagaatgtgaaatcagcccacagcacc
cgaaaccggtactcaagccagtggaccttgaccaagtgccaggcttccacccctgcccgg
accctcacctccgattggcgcactgtgggttctcagcatggtgtcactgtcactgagagt
gacagctacagtgccagtctatcccaagacacagacaaagggaggaacagtatggtgtcc
acggagagtgcttcctccacctatgaggaattggcccgggcctacgagcacgccaagctg
gaggaacagctgcagcatgccaagtttgagatcacagaatgcttcatctcggacagctcc
tcggaccagatgaccacaggcaccaacgagaacgccgacagcatgacgtctatgagtaca
ccctcagagcccggcatctgccgcttcactgcctctccacccaagccgcaggatgctgac
aggggcaagaacgtggctgtgcccatccctcaccgagccaacaagagtgactactgcaac
ctaccattgtataccaagtcagaggccttcttccgaaaggcagatgggcgggaaccctgt
cctgtggtcccaccccgagaggcctccatgagaaacctgactcgagcctaccatacccag
gcccggcacctcactctggaccctgccagcaagcccttgggcctcccccatccaggggcc
actgctgccaccgccacggccaccttacctcagaggactctggctatgccggccccccca
gctggcacagcacccccagcacctggccctactcccagtgagccctctgctccccctagt
gctgcccctccggcccccagcactgaacctccacgggccggaggcccacacaccaaaatg
gggggctccagggactcactactagaaatgagcaccccaggggtagggcgttctcagaaa
cagggggctggaacctattccaaatcctataccctggtatag

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