Arvicanthis niloticus (African grass rat): 143439412
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Entry
143439412 CDS
T08817
Symbol
Slc24a1
Name
(RefSeq) sodium/potassium/calcium exchanger 1 isoform X1
KO
K13749
solute carrier family 24 (sodium/potassium/calcium exchanger), member 1
Organism
anu
Arvicanthis niloticus (African grass rat)
Pathway
anu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
anu00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
143439412 (Slc24a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
anu02000
]
143439412 (Slc24a1)
Transporters [BR:
anu02000
]
Solute carrier family (SLC)
SLC24: Na+/(Ca2+-K+) exchanger
143439412 (Slc24a1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Na_Ca_ex
Motif
Other DBs
NCBI-GeneID:
143439412
NCBI-ProteinID:
XP_076781893
LinkDB
All DBs
Position
26:complement(37363206..37391808)
Genome browser
AA seq
1043 aa
AA seq
DB search
MRKLIRMGTQERRLLRPKRLHWSRLLFLLGMLIIGSTYQHLRRPQNHPSMWTKASSQQPI
KVASRDLTNNEMTVESSDLPEASSEVEGEMIVPQDTVITDETAPSIATEDTPNPPRTTKS
TPTPPKNNYSPTTAGTRRQKENMAPTPSRAPSHFISTSGRRRVKSYTPKLRRGRKSSSPT
HAKETGRMHTPSPVGAPRTTSPTPTGKDSETTATYRMLEPRPERTAGENMAASLKRMVPN
TPTFLIREVETNLVTPPSLVGKNTLGNLRRGERNSSATPPGAAPKHTPATSEDQTTVSTS
IGSTPATIHGSTVAQRISNPLSRTSAPAIRMASATNREKRLSTAHSTLVTPKGKATMITQ
VHRCVVVEPAPAVPMIPSLSMTTIPFPEAPSSGPSALPPDWSNLQPKGEYPPDLFTVEGR
RQGWVALHIFGMMYVFVALAIVCDEYFVPALGVITDKLQISEDVAGATFMAAGGSAPELF
TSLIGVFISHSNVGIGTIVGSAVFNILFVIGTCSLFSREILHLTWWPLFRDVSFYILDLS
MLIVFFLDSLIAWWESLLLLLAYALYVFAMKWNKQTELWVKEQLSKRPVAKVMALGDLGK
PSNGAIEETEQQDKKLKLPSVLTRESSSASLHNSIIRSTIYHLMLHSLDPLGEARPSKDK
QESLNQEARVFSQTKAESSQNEEEPAELHAVKVTPAPAPVAKGDQEEDPGCQEDVDEAEH
GGEMTGEEGEREAEVEGKEDEEGKTKTERKEDGQEEETEAEGKVDHEGQGEAHEDGTEVK
DSEGEMEANAEDQGEKGADGGGGSDAGDSEEEEDEEEEEEEEEEEEEEEEEEEEEESEEP
LSLEWPESRQKQAIYLFLLPIVFPLWLTVPDVRRQESRKFFVITFLGSIIWIAMFSYLMV
WWAHQVGETIGISEEIMGLTILAAGTSIPDLITSVIVARKGLGDMAVSSSVGSNIFDITV
GLPAPWLLFSLVNALQPVPVSSNGLFCAIVLLFLMLLFVISSIALCKWRMNKILGFTMFL
LYFVFLVISVMLEDRIISCPVSV
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaactgatcaggatggggacacaggagaggcggttactccgaccaaagaggctt
cattggagtcgcctccttttcctcctgggaatgttgattatcggttccacttatcagcac
ctgaggagaccccagaatcacccctcaatgtggacgaaagcctcctcccaacagcctatt
aaagtggccagcagggacctcaccaacaatgagatgacagtggagagcagtgaccttcca
gaggctagctctgaagtggagggtgagatgatagtaccccaagacacggtgattacggat
gaaacagcacctagcatagcaacggaggacacccccaatccacccagaacaaccaagagc
actccaacgccaccaaagaacaattatagcccaacaacagctggcacaagaagacaaaaa
gaaaacatggcacccacacctagcagagcaccaagtcacttcatctcaacttcaggcaga
cggagagttaaaagctataccccaaaactcaggcgcggaaggaagagttccagcccgact
cacgccaaagaaacaggaaggatgcataccccatccccagtaggtgcacctcgcaccacc
agccccacaccaacagggaaagacagtgaaaccacggcaacctataggatgttggaaccc
agacctgagagaacagcaggagaaaacatggcagcttctctcaagagaatggttccgaac
accccaactttcttaatacgtgaagttgaaacaaaccttgtgactcctccaagcctggtg
ggaaagaacaccctgggaaatcttaggagaggagaaagaaacagctctgccactcccccg
ggagcagccccgaagcacacccctgccacctctgaggatcaaacgacagtaagcaccagc
ataggtagcaccccagcaaccatccacggttctactgttgcccagagaattagcaacccc
ttgtctagaaccagtgcaccagccattagaatggcctcagccaccaacagggaaaagaga
ctttccacagcacacagcaccttagtaactcccaaaggcaaggcaaccatgatcacacag
gtccaccgctgtgtggttgtggagccagctccagctgtacccatgattccatctctaagc
atgacaaccatcccgttcccagaggcacctagttccggtccctcagctttgccacctgac
tggtcaaacctccaacccaagggggagtatcccccagatctgttcactgtggagggtcga
cgacagggctgggtggccctccacatcttcggcatgatgtacgtgtttgtggccttggcc
atcgtgtgcgatgagtactttgtcccagccctcggagtcatcacagacaagctgcagatc
tccgaggatgtggcaggggccacattcatggctgccggaggctccgcccctgagctcttc
acctctcttattggtgtctttatctcccacagcaacgtgggtattggtaccatcgtgggc
tctgccgtgttcaacatcctttttgtcatcggcacctgttccctcttctcccgggagatc
ctccacctcacctggtggcccctgttccgcgacgtctctttctacatccttgacttgtct
atgctcatagtcttcttcctggacagtctcattgcctggtgggagagcctgctgctgctg
ctggcctacgctctctatgtgttcgctatgaagtggaacaagcagactgagctctgggtg
aaagagcagcttagcaagaggccagtagccaaagtcatggctctgggagacctcggcaag
cccagtaatggtgccattgaggaaaccgaacaacaggacaagaagctgaagctcccatct
gtgctgacccgagagagcagctctgcctcgctgcacaacagcatcatcaggagcaccatc
taccacctcatgctccacagtctggaccccctgggggaagcccgcccctccaaggacaag
caggagagtttgaatcaggaagccagagtcttctcccagaccaaagcagaaagcagccaa
aacgaggaggagccagccgagctccatgcggtcaaggtcactccagcccctgctccagtc
gccaagggagatcaggaggaggatccaggctgccaggaagatgtggacgaagctgaacac
ggaggagagatgacaggtgaagagggtgaaagggaagccgaggtggaaggaaaagaagat
gaagaagggaaaactaagacagaaaggaaagaagatgggcaagaagaagaaactgaggca
gaaggaaaagttgatcatgaagggcaaggtgaagcccatgaagacggcactgaggtgaaa
gatagtgagggtgaaatggaagccaatgctgaagatcaaggtgagaaaggtgcagacggt
ggaggggggagtgatgcaggggacagtgaggaagaggaggatgaagaggaggaagaggag
gaggaggaagaggaagaggaggaggaagaggaggaggaagaggaggaaagtgaggagcct
ctgtccctggagtggcctgagagcaggcagaagcaggccatctacctctttctcctgccc
atcgtgttcccactgtggctgacggtacctgatgtacggaggcaggagtccaggaagttt
tttgtcatcaccttcctgggatccatcatctggatagccatgttctcatacctcatggtg
tggtgggctcaccaggttggcgaaaccatcgggatttctgaagagattatgggtttgaca
atcttagcagcaggcacttcgatccctgaccttatcaccagtgtgatcgttgcccggaaa
ggcctgggagacatggccgtgtcaagctcagtgggcagtaacatctttgatatcacagtg
ggcttgcctgccccttggcttctcttctctctcgtcaatgccctgcagcctgttcctgtc
agcagcaacggcctgttttgtgcgatcgtcttgctgtttctcatgcttctgtttgtaatc
tcctcgatcgcattgtgtaaatggaggatgaacaagatcctgggcttcacgatgttcctt
ctttactttgtgttcttggtaatcagtgtgatgttagaagatcgaatcatatcctgtcct
gtatctgtctga
DBGET
integrated database retrieval system
