KEGG   Arvicanthis niloticus (African grass rat): 143439799
Entry
143439799         CDS       T08817                                 
Symbol
Helq
Name
(RefSeq) helicase POLQ-like isoform X1
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
anu  Arvicanthis niloticus (African grass rat)
Brite
KEGG Orthology (KO) [BR:anu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:anu03400]
    143439799 (Helq)
Enzymes [BR:anu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     143439799 (Helq)
DNA repair and recombination proteins [BR:anu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    143439799 (Helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DUF7898 DUF4332 DNA_pol_lambd_f
Other DBs
NCBI-GeneID: 143439799
NCBI-ProteinID: XP_076782469
LinkDB
Position
27:22379135..22419004
AA seq 1069 aa
MEDGCLRIRRRVSVRKRNRGNPESLGASPTLAELQPAEDTEDEAAVGSRRRKTRSPEPAQ
ENDSEEDMFGDYNSFTESSFLAQVDDLEQKCMQLLEHGTHETDSDTRDLCSEGIKNNLGM
NTGSDFTDSETNEHVKRQSDLDDPGEPEPGSELSFDVPSSQILYFGNMQNSSKALGSQSA
KERDGNSHKPSNANLAHSHIEQPHQDNDFSNVGASSEMSRRKSIRDHLKSAMAGNARAQT
PVFPRTKQLRETLLSEEISVAKKAIESPSDDLGPFYSLPSKVRDLYVQLKGIRKLYDWQH
TCLTLRSVQERKNLIYSLPTSGGKTLVAEILMLQELLCRQKDVLMILPYVAIVQEKVSSL
SSFGIELGFFVEEYAGGKGRFPPIKRREKKSLYIATIEKGHSLVNALIEAGRISTLGLVV
VDELHMIGEGSRGAILEMTLAKVLYTSKTTQIIGMSATLNNVEDLQAFLKAEYYTSQFRP
VELKEFLKVNDTIYEVDGRAADGMTFSRLLSYKYSDALKKMDPDRLVALVTEVIPNYSCL
VFCPSKKNCENVAEMLCKFLSKDYLNHRKKEKCEVIKNLRNVGHGKVCPVLKRTVPFGVA
YHHSGLTSDERKLLEEAYSTGVLCLFTCTSTLAAGVNLPARRVILRAPYVANSFLKRNQY
KQMIGRAGRAGIDTAGESILLLQEKDKQQVLELINGPLESCYSHLVEEFTKGIQSLFLSL
IGLKIATSLGDIYQFMNGTFFGVQQKILLKEKSLWEITVDALEHLTEKGLLQKDSHGDSE
GLQCHFRITKLGQASYKGAIDLAYCDTLYRDLKKGLEGLVLESLLHLVYLTTPYDLAAQS
EPDWMVYFRQFSQLSPAEQNVAALLGVSEGFIGKKASGQAIRKKVDKNVVNRLYLSFVLY
SLLKETNVWSVSEKFNMPRGYIQNLLMGAASFSSCVLHFCEELEEFWVYKALLVELTKKL
TYCVKAELIPLMEVTGVLEGRAKQLYSAGYRSVMHLASANPEVLVKTIDHLSRRQAKQIV
FSAKMLLHEKAEALQEEAEELLRLPADLPGLGGSNSERAGSHAGNETLC
NT seq 3210 nt   +upstreamnt  +downstreamnt
atggaggacggctgtctccgcatccgccggcgggtgtctgtccgcaaaaggaaccgcggc
aacccagagagcctcggtgcctccccgaccctggccgagctccagcccgccgaggacacg
gaggacgaagctgcagtcgggagccgccggcggaaaacccggagcccggagcccgcccag
gaaaatgacagcgaagaagacatgtttggtgactataacagctttacagaaagttccttc
ttagctcaagttgatgacctggaacagaaatgtatgcaactgcttgaacatgggacccat
gaaacagactctgacaccagagacctttgttcagaaggcatcaaaaacaacctcgggatg
aatactggaagcgactttactgactccgaaactaatgagcacgtaaagaggcagagtgat
ctagatgaccccggtgagccagaacctggaagcgagctttcgtttgatgtgccttcttct
caaattttatactttggaaatatgcagaactcttcaaaagctttgggcagtcagtctgct
aaggaaagagatgggaactcacataagccatcgaatgccaacttggcccacagccacata
gagcaaccccaccaagataatgacttctctaatgtcggggcttcttcagagatgagcagg
agaaagagtattagagaccatctgaaatctgccatggctgggaatgccagggcccagacc
ccagtgtttcccaggactaaacaactcagagagactctcctgtctgaggagatcagcgtt
gctaagaaagccattgagtcaccgtcagatgatcttggtcctttttattcactacccagc
aaagtgagagacctctatgttcagttgaaaggaatcagaaaactatatgactggcagcat
acttgtttaacgttaagatctgtgcaagaaagaaaaaatttgatatattccttgccaacg
agtggtggaaaaacccttgtggctgagatcttaatgctacaagaactactctgccgacag
aaagatgttttaatgatccttccgtatgtggcaattgtccaagaaaaggtttccagtttg
tcgagttttggtatagaacttggtttctttgttgaagaatatgctggaggcaagggaaga
tttcctccaataaaaaggagggaaaagaaatcgctgtatatcgccactatcgagaaaggg
catagcctggtgaacgccctgattgaagccggaaggatcagcactctaggtctggttgtc
gtcgacgagctgcacatgattggtgaagggagccgtggtgccatactggagatgaccctg
gcgaaagtcctctacaccagcaaaacaactcagattatcggcatgagtgcaacactaaac
aacgtagaagacctacaggcgttccttaaagccgagtattacaccagtcagttcagacca
gttgaattaaaagaattcctgaaagtaaatgacacaatctatgaggtggatggccgggct
gcagatggcatgaccttctcacggctcctgagttataagtactctgatgccctgaagaaa
atggatcccgaccgcttggtagcgttggtgacagaagttattcctaactactcctgcctg
gttttttgtcccagtaagaagaactgtgaaaatgtagcagaaatgttgtgcaagttttta
agcaaggattatctaaaccacagaaagaaagaaaagtgtgaagtgattaaaaacttgagg
aatgtcggccatggtaaagtgtgccctgtcctgaagcgcactgtccctttcggcgttgcc
tatcaccacagtggtttaactagtgatgagcggaagcttctggaagaggcctactccaca
ggtgtgctctgtctcttcacctgcacgtccaccctggcagccggggtcaatctgcccgca
cggagagtcatcttgagagctccctacgtggctaattcgttcttaaagaggaatcagtac
aagcagatgattggcagggctggccgtgctgggatagacactgccggggagagcatcctt
ctgctgcaagagaaagacaagcagcaggtcctggaactaataaacggaccactggaaagc
tgctacagccatcttgttgaggaattcaccaagggtatccagagtttatttctctcctta
attggtctgaagattgcgacaagtcttggtgacatatatcagtttatgaatggaacattt
tttggtgttcagcaaaagattttattgaaagaaaaaagtctctgggaaataactgttgac
gcacttgagcacctgacagagaaaggacttctacagaaagacagccatggcgacagtgag
gggttacagtgtcatttccgtattacaaaactgggccaagcttcttataagggagccatt
gatttggcctattgtgacactctgtacagagacttgaagaaaggtctggaaggacttgta
ctggagagtcttctccatctggtctacctaaccacgccctacgaccttgctgctcagtct
gagcctgactggatggtgtacttcaggcagttcagtcaactcagcccggcagagcaaaat
gtagctgctctcctcggagtctccgaaggctttattggaaagaaagcatcaggacaagcc
atcagaaagaaggtggacaagaacgttgtcaacagactctatctgtcttttgtcctttat
tccttgctgaaagagaccaacgtttggagcgtgtctgagaaatttaacatgccccgagga
tatatacagaatctgcttatgggagctgcctcgttctcatcttgcgtgttacatttctgt
gaggagctggaggaattttgggtttacaaagccctcttggtggaactcaccaagaaactg
acgtactgcgtgaaggcggagctaatccctctcatggaagtgacaggggtcttggagggt
cgagcaaaacagttatatagtgcaggttacagaagtgtcatgcatttagccagtgccaac
ccagaagtgctggtgaagacaattgatcatctgtccagacggcaagccaagcagattgtt
ttctcagccaagatgctgttacatgaaaaggcagaggcgttgcaagaagaagcagaagaa
ttactgagattgcctgcagacctccctgggcttgggggctccaactctgaaagggctggc
agccatgctgggaatgaaactctgtgctag

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